Xenopus laevis (African clawed frog): 398521
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Entry
398521 CDS
T01010
Symbol
rpn1.S, ost1, xrpn1
Name
(RefSeq) ribophorin I S homeolog precursor
KO
K12666
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla00510
N-Glycan biosynthesis
xla00513
Various types of N-glycan biosynthesis
xla01100
Metabolic pathways
xla04141
Protein processing in endoplasmic reticulum
Module
xla_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
398521 (rpn1.S)
00513 Various types of N-glycan biosynthesis
398521 (rpn1.S)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
398521 (rpn1.S)
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Motif
Pfam:
Ribophorin_I
DNA_repr_REX1B
CT398_CC
XhlA
DUF948
Motif
Other DBs
NCBI-GeneID:
398521
NCBI-ProteinID:
NP_001082514
Xenbase:
XB-GENE-17345617
UniProt:
Q7ZX69
A0A974D2W7
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Position
4S:complement(114744336..114756024)
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AA seq
595 aa
AA seq
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MERSAAFFLCFLAAIAVSSRALDLVNEDVKRTVDLSSHLAKVTAEITISNPGPGAVHSFL
LALESELSSHLAYLGVKGEDEEDGTLQVQETNVKGKSGLQYTVHFGSSLAPGAKTKVIVE
TVFTHVLQPYPTQITQAEKQFVTFEGNHYFFSPYPTKSQTTRVKLASKNVETYTKLGNPT
RSEELIEYGPFKDIAPWSQDPLKVHYENNSPFLTITSMTRLIEVSHWGNIAVEETVDLKH
TGAYLKGPFSRYDYQRQPDSGISSVKSFKTILPAAAQDVYYRDEIGNISTSHLLILDDSV
EMEIRPRFPLFGGWKTHYLIGYNLPSYEYLYNLGDQYALKMRLIDHVFDDQVVDSLTVKI
ILPEGAKNIHLDNPYDINRAPDELHYTYLDTFGRAVIVAHKNNLVEQHIQDIVVHYSFNN
ILMLQEPLLVVAAFYILFFTVILYVRLDFSITKDPAAEAKMKAACITEQILTLVNKRLGL
YRHFDEAVNKYKLSRDISSLNSGKKTLETEHKNLTNEIASLQSKLKAEGSDLCDKVAEIQ
KLDTQVKEIVLKCSSEAERLVSGKLKKESYIENEKQHSNRRQELVNKIDNILVGL
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggagcggtcagcagctttcttcctttgcttcctggcagccatcgctgtctcctccagg
gcgctggacttggtgaatgaggatgtcaagcgcacagtggacctcagcagccatttagcc
aaagtgacggcggagattactatttctaacccgggaccgggcgccgttcattcctttctg
ttggccctggagtcagagctgagcagccatttggcctacctaggggtgaaaggggaggat
gaagaagatggaacccttcaggtacaagaaacaaacgtaaaaggcaaaagtggattacaa
tacacagtgcattttggatcctctcttgcccctggagctaaaaccaaagttatcgtcgag
acagtctttacacatgtgcttcagccatatcccacccagatcacacaggctgagaaacag
tttgtcacatttgaaggcaaccattatttcttttcaccttacccaaccaagtcccagacc
acacgcgtcaagctcgcctctaaaaatgttgagacatataccaagctcggaaaccctacc
agatctgaggaactcatagaatacggtccatttaaggatattgcaccttggagccaggac
cccttaaaagttcactatgagaacaacagcccattcctaacaattactagcatgacacgc
ctgattgaggtctctcactggggtaacattgctgtggaagagacggttgacttgaaacac
accggcgcatatctgaaaggacccttctcaagatatgattaccagcgccagccagacagt
ggcatttcatcagtcaagtcatttaagaccatccttcctgctgccgcccaagatgtttat
tacagggatgagatcggcaacatttctacaagccacttgttgatcctcgatgactctgtg
gagatggaaatccgtcccaggttcccactttttggtggatggaaaacccattatttaatt
ggttataacctgccaagttatgagtatctttataatcttggtgaccagtatgctctgaag
atgaggcttattgatcatgtgtttgatgaccaagttgtggattcgttaactgttaaaata
atcctgccagaaggtgccaaaaacatccatttggataacccctatgacataaaccgtgct
cctgatgagctgcactacacttatctggacacatttggcagagcagtcattgtagctcat
aagaacaatctggttgagcagcatatacaggacattgtggtacattactcctttaacaat
atattaatgctgcaggaaccactgctagttgtggcagcattctacatattgttcttcact
gtcattctctatgtgcgactggatttctccatcactaaggatccagctgcagaggccaag
atgaaagctgcctgcatcactgaacagattcttacactggtaaacaagagacttgggctg
taccgtcactttgatgaggctgttaacaagtataagctgtcccgggatatatcctcctta
aacagtggcaagaaaacactggagactgaacacaagaatctgaccaatgaaattgcttcg
ctacagtccaaacttaaagctgaaggctctgatttgtgtgataaagttgcagaaattcag
aagctggatacccaagtgaaggagattgttttgaaatgctcctctgaagctgaacgtctc
gtttctgggaaactaaaaaaggaaagttacattgagaacgagaagcagcactcaaacagg
aggcaggagctcgtcaacaaaatagacaacattcttgttggcttgtaa
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