Xenopus laevis (African clawed frog): 398532
Help
Entry
398532 CDS
T01010
Symbol
bbx.S
Name
(RefSeq) HMG box transcription factor BBX isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
398532 (bbx.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
398532 (bbx.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
398532
NCBI-ProteinID:
XP_041440065
Xenbase:
XB-GENE-17334005
UniProt:
A0A8J1MG56
LinkDB
All DBs
Position
2S:94977994..95037318
Genome browser
AA seq
904 aa
AA seq
DB search
MKGSARNKDHSTEGEGAGKRPKRKCLQWHPLLANKIPDFSEEDEEEEDEEDIDKVQLLDG
DGLENDETEDNETSEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWAYLD
PNEKQKYTDMAKEYKDAFMKANPGYKWCPTTNKPVKALSPTVTTRKKLWAFSSETVKDAS
SPKKVPEEDEMPQLNFSIADPTQMGGLSMLLLAGEHALTSHRDNAVTGRMEHVLSDPEVS
SGICPLTESGFPQENRKSSLFHFDEVSSSTSHSDDPAPAKQSEKSALFQFAEISSDTSQT
QIHCVDPAKRCGKSSLFQLAEISSSSSHSDSSASEKQCGTSALFQLAEMCVASEAVKIEI
SRNVDTDDLVRKPVPMKEEIEGLSEDLISRNLNDSSHICEKVEANNVKTKKHKAHSLEPI
DAEHLGLVKREKIKKKKKKNKSDHDAAEKASPKKTCKKRQSSESDIESVMYTIEAVAKGD
WGIEQNSSSPSKKAHFATSPKNSIFDLKSTKKKVKSKEKKLQKDKTSDSTKELSVPEPII
TASIIDSPSKTPESLKSEPLTPTDELPPMCLPEMQEMLKTEDCNSNKKTEACGSRKSERS
CKGALYKTLVSEGMLTSLRANVDRGKRNSGKGCLSDHEGCWSEDTWAFNQTGATGSKKLK
KIKPKEESTLGLAKLEEEFENKFNSLPQYSPVTFDRRNTSLPRKKKKTSNCEAEPQKAYK
GVFQPQKKNLFHKIVNKYKHKKEKLMILDKAISEDKNSRENSPRASNSAFSIPECTAIQE
PLVGSQKRKARKSKITHLVRSVDRQTSLKGQILDAKPLPSICEKICNKDGTRRGEQLIAR
ETEVEQNNSIAQDMPAVSAFFSLAALAEVAAMENAHRSPRGGLSRDGQKKEMSQAAVLIS
CADQ
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcagtgcaagaaataaggaccattctactgaaggagaaggagctggaaaacga
ccaaagagaaagtgcctgcaatggcacccactgcttgcaaacaaaatccctgacttttct
gaagaagatgaggaagaagaggacgaagaagatattgataaagtccagcttcttgatggc
gatggtcttgaaaatgatgaaacagaagacaatgagactagtgagcaaagagctcgcagg
ccaatgaatgctttcctcttattttgtaaacgtcatcgctctctagtgcgtcaggaacat
cctcgtctggataatcgcggtgctacaaaaatactggcagattggtgggcctatctcgac
cctaatgagaagcaaaagtacacagatatggctaaagagtacaaagatgcatttatgaaa
gcaaatccagggtacaagtggtgtcctacaactaataaaccagtgaaagccctttcacct
actgtaactaccaggaaaaaactgtgggcctttagctcagaaactgttaaagatgcttca
agtcccaagaaagtcccagaagaagatgaaatgccacagcttaattttagtattgcagat
cccacacaaatgggaggactgagtatgctgcttcttgctggtgaacatgccttgacttct
cacagggataatgctgtgactggaagaatggaacatgtattaagtgaccctgaggtttct
tcaggtatttgtcctttaactgaatcagggtttccccaggaaaataggaaatcctcatta
tttcattttgatgaggtatcttccagcacatcacattcagatgacccagcacctgctaag
caaagtgagaagtcagcactttttcagtttgctgagatatcttcagatacttcacagaca
cagattcattgcgttgatcctgcaaaacgttgtgggaagtcttcccttttccagttagca
gagatatcttcaagttcatcacattctgattcatctgcatcagaaaagcagtgtgggaca
tcagcattgtttcagcttgcagagatgtgcgtggcttccgaagctgtaaaaatagaaata
tccaggaatgtagatacagatgatttggtaagaaaacctgttcccatgaaggaagaaata
gaaggcttgtcagaggacctgatttctagaaacctcaatgatagctcacatatctgtgag
aaagtagaagccaataatgttaaaactaaaaagcacaaagcacattccctagaacctata
gatgcagaacatttaggacttgtgaaacgagaaaaaataaaaaagaagaagaaaaaaaat
aaatcagaccatgatgctgcagagaaggcatccccaaagaagacctgtaaaaaaaggcaa
tcgtcggagtctgatattgaaagtgtcatgtacactatagaagctgtcgcgaaaggtgac
tggggtattgagcaaaattccagttctccaagcaagaaggcacactttgctactagccct
aaaaacagcatttttgatttaaaatcaacaaagaaaaaagtaaaatcaaaagaaaaaaaa
ctgcagaaggataaaacatcagacagtaccaaagagctgtcagtgccagaacccataatt
actgcatctatcatagattcaccctccaagactcctgaaagtttaaaatcagagccactt
actcctactgatgagctgcctcccatgtgcttgccagaaatgcaagaaatgcttaaaact
gaggactgtaacagcaataaaaaaacagaagcttgtgggtcaaggaaatcagaacggtct
tgtaaaggtgctctttataagacactggtgtccgaaggcatgctgacatcactgcgggcc
aatgttgatagaggcaaaagaaactcgggaaagggctgtttatcagaccacgaaggatgc
tggagtgaagacacttgggcatttaatcagactggagccactgggagtaaaaagctgaaa
aaaatcaaaccaaaggaagagtcaactcttggattagcaaagctggaagaagagtttgaa
aataagtttaatagccttcctcaatacagccctgttacgtttgatcggagaaatacatca
cttccaaggaagaagaaaaagaccagcaattgtgaagctgagccacagaaagcctataaa
ggtgtattccagcctcagaaaaagaacctctttcacaaaattgtaaacaaatataaacac
aaaaaggaaaaactaatgattttggataaagccatatcagaagataagaacagcagggag
aactcacccagagccagtaattctgcattcagcattccagaatgtacagccatacaggag
cctctggtaggaagccagaaaagaaaagcaagaaaatcgaagataacccacctcgttaga
tctgtggatcgtcagacgtcattaaaaggacagattttagatgcaaaaccactgcctagc
atttgtgaaaagatctgcaacaaagatggaacccgcagaggtgaacaattaatcgctaga
gaaactgaagtggaacagaataatagtattgcccaagacatgcctgctgtgtctgcattt
tttagtcttgctgctttggccgaggtagctgcaatggaaaatgctcacagaagtccaaga
ggaggcctttcccgagatggacagaagaaagaaatgtcccaggcagctgtgctgatttca
tgtgctgatcagtaa
DBGET
integrated database retrieval system
