Xenopus laevis (African clawed frog): 398545
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Entry
398545 CDS
T01010
Symbol
psip1.S, dfs70, ledgf, paip, psip1, psip2
Name
(RefSeq) PC4 and SFRS1 interacting protein 1 S homeolog
KO
K25057
PC4 and SFRS1-interacting protein
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
398545 (psip1.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
398545 (psip1.S)
Spliceosome [BR:
xla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
398545 (psip1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
DUF3916
Motif
Other DBs
NCBI-GeneID:
398545
NCBI-ProteinID:
NP_001082534
Xenbase:
XB-GENE-1007143
UniProt:
Q6NRM3
A0A974I158
LinkDB
All DBs
Position
1S:113337946..113364683
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AA seq
566 aa
AA seq
DB search
MMRDFKPGDLIFAKMKGYPHWPARVDELPDGAVKPPSNKMPIFFFGTHETAFLGPKDIFP
YEENKEKYAKPNKRKGFNEGLWEIENNPKVKFSSPQNILAFTNAALREAAEAQMQEDLEE
NEEKLTKKRKSTTSKILGKHSDSSSSGIESPEKDMNATKEDTSISDQLGSEDAAIPKDSP
VVVKGRRGRKRKVDILAESVQETGAAPVSPPIQSPKRGRPATGEVKVPKPRGRPRLIKPP
PSPERGMMSEEDQSKKKSPERKPKKQTLQKKDEVLRDEEEKPRKDTDKKEATMDTESKKK
VAAKIDSPAPSDSDEDEQEDEMKSKGGKVSQVAQKRSLKAQQEKEISEKKRKQEETVDME
SQSKDEVKKDDVKKLDKKKETSTDARLQRIHAEIKSSLKIDHLDINRCISALDELASLQV
SMQQAQKHTDMITTLKKIRRFKASQVIMDKATMLYNKFKNMFLVGEGDSVITQVLNKSLA
EQRQHEEANKAKEPGKRGPHKRLEKEQNPDANTLNGDRETPDQAQQNGDSSEETEEKEEK
TSKRPGSATKGNEGNKQSQDDSAPDN
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgtgatttcaaacctggggatttgatctttgccaaaatgaaaggttacccacac
tggccagctagggtggatgaacttcctgatggggctgtgaaacctccctcaaataaaatg
ccaattttcttttttggcactcatgagacagcttttttgggtccaaaagacatattccct
tacgaagaaaataaggagaagtatgccaaacctaataagcgaaagggctttaacgagggg
ttgtgggaaattgagaacaaccctaaggttaaattttcaagtccgcagaatatcttggca
ttcactaatgctgctctaagagaggcagcagaagcgcaaatgcaagaagacctagaggaa
aatgaggagaaactgacaaagaaaaggaaatcaaccacatcaaagattttaggtaagcat
tctgattcatcctccagtggaattgagtctcctgagaaagatatgaacgccacaaaggaa
gatacaagcatttcggatcaacttggcagtgaagatgccgctatcccaaaagattcacct
gttgtagttaaaggcagaagaggtagaaagcgaaaggttgatattctggctgagtctgtg
caagagacaggggctgcaccagtgagtccaccaatacagagccctaaaagaggcagacca
gccacaggagaggtcaaggttccaaagccaagagggaggccgagattaataaaaccccct
ccctctccagaacgaggcatgatgagtgaagaagatcagagtaagaaaaaatctccagaa
agaaaaccaaaaaaacaaacgcttcagaaaaaggatgaggtgttaagggacgaagaagaa
aaaccaagaaaagacacagacaagaaagaggcaaccatggacactgagtccaaaaagaaa
gttgcagcaaagattgattctcctgctccgtcagattctgatgaggatgagcaagaagat
gaaatgaagagcaaaggtggcaaagtctcccaggtggctcaaaagcgcagcctgaaagct
caacaggaaaaagagatttctgaaaaaaagcgcaaacaggaggaaactgttgacatggag
agccagtctaaggacgaggtgaaaaaagatgatgttaaaaaactggacaagaaaaaggaa
acatccactgatgccagacttcaaaggatacatgcagaaattaagagctctttaaagatt
gaccacttggatataaacagatgcatcagtgctttggatgagctggcttctctccaagta
agcatgcagcaagctcagaagcacacagacatgatcactaccctaaaaaaaattcgtagg
ttcaaagccagccaagtgattatggataaggcaaccatgctgtacaacaaattcaagaat
atgttcctggttggggaaggtgattctgtcatcactcaagttttaaataaatctctagca
gagcaaaggcagcatgaggaagccaataaagccaaggaacctggaaagagaggacctcac
aagagactggaaaaagagcaaaatccagacgcaaatactttaaatggtgaccgggaaact
ccagatcaagcacaacaaaatggagacagcagtgaggagacggaggagaaagaagagaaa
acttcaaagcgccctggcagtgcaacaaaaggcaacgagggcaacaaacaaagccaagac
gattctgcgccagacaactaa
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