Xenopus laevis (African clawed frog): 398565
Help
Entry
398565 CDS
T01010
Symbol
abcf3.S, abcf3
Name
(RefSeq) uncharacterized protein LOC398565
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
xla03012
]
398565 (abcf3.S)
Translation factors [BR:
xla03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
398565 (abcf3.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_22
RsgA_GTPase
MMR_HSR1
AAA
AAA_29
NACHT
AAA_15
AAA_16
DUF1672
RNA_helicase
DUF87
DUF4238
ATP-synt_ab
AAA_23
YtzH
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
398565
NCBI-ProteinID:
NP_001082556
Xenbase:
XB-GENE-6087318
UniProt:
Q5U5A7
A0A974CTR1
LinkDB
All DBs
Position
5S:complement(86721077..86747263)
Genome browser
AA seq
711 aa
AA seq
DB search
MATFVDILRNELPQLDTELLQYVTDILDSGHADFESETDLFEAVGELLQDVSRDTKDDDD
IRDICQRIYRTMHLENHQLPTQDQVRLQAPIQLSKISESYEVDTEIQTVMLLKKDQSSTV
DVKRLEKAEAKLKSKQEKRSERDSQKAGGNVVMEEACASQAASKKENRIESSGKNKSYDI
RIENFDVSFGERVLLTGAELHLASGRRYGLVGRNGLGKTTLLKMLAGRSLRVPSHISILH
VEQEVAGDDTPALQSVLECDTLRESLLQEEKELNAKISAGRGDGSESSRLSEIYSKLEEI
EADKAPARASVILAGLGFKHTMQQQLTKEFSGGWRMRLALARALFARPDLLLLDEPTNML
DVRAILWLESYLQTWPSTILVVSHDRNFLNAVATDIVHLHSQRLEAYRGNFESFLKTKEE
RLKNQQREYEAQHQYREHIQVFIDRFRYNANRASQVQSKLKLLEKLPELKPMEKDTEVIL
RFPDGFEKFSPPILQLDEIDFWYSSDQPIFKKLSVSADLESRICVVGENGAGKSTMLKLL
MGELSAVQGIRNAHRNLKIGYFSQHHIDQLDLNISAVELLAKRFPGKPEEEYRHQLGSYG
ISGELAVRPVASLSGGQKSRVAFAQMTMPCPNFYILDEPTNHLDMETIEALGRALNKFKG
GVILVSHDERFIRLVCQELWVCENGGVTRIEGGFDEYRNILQEQFLREGFL
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccttcgtggacattctaagaaacgagctcccgcagctggacacagagcttctg
caatacgtaacagatatccttgatagtggacatgcagactttgaatcagagactgatttg
tttgaagctgtgggagagctgctgcaggatgtttccagggataccaaggatgatgatgat
atccgtgatatctgtcagcgtatttatagaacaatgcacctggagaatcaccagctacct
acacaggaccaagtccgtctacaagcccccattcagctctccaagatttcagagagttat
gaagtagatactgagatccagactgtcatgttgctgaagaaggaccagtcatcgacagtg
gatgtgaaaaggctggagaaagcagaagccaaactgaagtctaagcaagaaaaacggtct
gagcgagattcacaaaaagcaggtggaaatgtggtaatggaggaagcctgtgccagccaa
gctgcaagtaagaaggagaatcggatagaatctagtggaaaaaacaaatcatacgacata
cggattgagaactttgatgtatcatttggagaaagggttttgttgactggagcagagctg
catttggcctctggccgtcgatatggattggttgggcgaaatggtttgggtaagactacc
ctgttaaaaatgcttgcggggcgcagtcttcgtgtcccctcacatatcagcatcctacac
gtggaacaggaggtggctggtgatgatacacctgcattacagagtgttctggagtgtgac
acacttcgggaaagccttttacaagaggaaaaggagcttaatgcaaagattagtgcaggc
aggggtgatggatcagagagttcgcgtctctctgagatctacagcaaactggaagagata
gaggctgacaaagctccagcaagagcctctgtaatccttgctggtttgggatttaagcac
actatgcagcaacaattgacaaaggaattctccggagggtggcgcatgagattggccttg
gcccgggctctctttgccaggccagacctcctgctgcttgatgaaccgacaaacatgttg
gacgtccgagccatcttatggttagagagttaccttcagacttggccctccacaatcctt
gttgtttcccacgaccgtaacttcttgaatgctgtggcaactgatatagttcatctgcac
agtcagcgtttggaagcttatcggggaaactttgagagttttttgaaaaccaaggaagaa
cgtcttaaaaaccaacagcgggagtatgaggcacaacaccaataccgtgaacatatacag
gttttcattgatcgttttcgatacaatgcaaatagagcctcacaggttcaaagtaaactc
aaacttctagagaaactaccagaattaaagccaatggagaaagatacagaagtgatatta
aggtttcctgatgggtttgaaaagttctcccctcctatccttcagctggatgaaattgat
ttctggtattcctcagatcagccaatcttcaagaaactttctgtatctgcagaccttgaa
tctcgaatttgcgtggtgggggagaatggagctgggaaatcaacaatgttaaagctgctc
atgggagaactgtctgcagtacagggaattcggaatgcacacaggaacttaaagattggt
tattttagtcagcatcatattgatcagctggatctgaacatcagtgctgtggagcttcta
gcaaagcgattccctggtaaacctgaggaggaataccgccaccagctgggaagttatggg
atatctggcgaattggcagttagaccagttgctagtctttctggaggccaaaagagccga
gtggcatttgcacaaatgaccatgccctgtcccaacttttatattttggatgaacctaca
aatcacttggatatggagaccattgaagctttggggagagccttgaataaattcaagggg
ggagtgatcttggtatctcacgacgaacggtttatcagactcgtgtgccaagagctttgg
gtttgtgaaaatggtggtgtgacacgaattgaaggtggctttgatgagtacaggaatatt
ttacaagagcagtttctccgggagggattcctatag
DBGET
integrated database retrieval system
