Xenopus laevis (African clawed frog): 398678
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Entry
398678 CDS
T01010
Symbol
rpl4.S, l1b, rpl1, rpl1b, rpl4-a, rpl4-b
Name
(RefSeq) 60S ribosomal protein L4-B
KO
K02930
large subunit ribosomal protein L4e
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
398678 (rpl4.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
xla03011
]
398678 (rpl4.S)
Ribosome [BR:
xla03011
]
Ribosomal proteins
Eukaryotes
Large subunit
398678 (rpl4.S)
Archaea
398678 (rpl4.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L4
Ribos_L4_asso_C
Motif
Other DBs
NCBI-GeneID:
398678
NCBI-ProteinID:
NP_001082721
Xenbase:
XB-GENE-6255762
UniProt:
P02385
A0A974D7S1
Q7SY96
Structure
PDB
PDBj
LinkDB
All DBs
Position
3S:36998877..37006726
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AA seq
401 aa
AA seq
DB search
MAVSMACARPLISVYSEKGETSGKNVTMPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSK
LAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN
TTQKRYAVCSALAASALPALIMSKGHRIEEIPEVPLVVEDKVESYKKTKEAVLLLKKLKA
WNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCVIYNENNGIIKAFRNIPGITLLNVSKLN
LLRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRILKSQ
EIQRALRAPNKKVKRRELKKNPLKNLRIMMRLNPYAKTARRHAILQQLENIKAKEKKPDD
GKPKAKKPLDAKTKMIKLAKAKKRQARAEAKTAEAKTAESK
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcagcatggcctgcgctcgtccgctaatatcagtgtactctgaaaagggggaa
acatctggcaaaaatgtcaccatgcctgcagtgttcaaggcccctattcggcctgatatt
gtcaactttgttcacacaaacctgcgcaagaataaccgtcaaccctacgcagtgagcaag
cttgctggtcaccaaacaagtgctgaatcatggggaacaggtcgagctgttgctcgtatt
ccccgtgtgcgcggaggaggaactcaccgttctggtcagggtgcctttggaaacatgtgt
cgtggtgggcgtatgtttgccccaaccaagacctggagacgctggcatcgtagagtcaat
acgacccaaaagcgctatgcggtctgctctgcactggctgcctcagcccttcctgctctt
attatgtctaaaggtcaccgtattgaggagatccccgaggttccccttgttgttgaagat
aaagtggaaagctataagaaaacaaaggaagcagtccttttgttgaagaagctgaaagcc
tggaatgacataaagaaggtttatgcttctcagcgtatgcgcgccgggaaaggtaagatg
aggaacagacgccgaattcagcgcagagggccctgtgtaatctacaatgaaaataacggc
attataaaagccttcagaaatatcccaggtatcaccctcctcaatgtaagcaagctgaac
cttttaaggctagctcctggtggccacgttggacggttctgtatttggacagaaagcgca
ttccgcaaattagatgatctctacggtacatggcgcaaatcagccaagctgaaggcagat
tacaaccttccaatgcacaagatgacaaacacagatctgaccagaatcctaaaaagtcag
gagatccagcgggctctgcgtgctccaaacaaaaaggtgaagcgaagggagctgaagaag
aacccactgaagaacctaagaatcatgatgaggctgaacccatatgcaaagaccgcaagg
cgtcatgctatcctgcagcagcttgagaatattaaagctaaagaaaagaagccagatgat
ggtaagcctaaagcaaagaagccactggatgcaaaaacaaaaatgatcaagctggccaaa
gcaaaaaagaggcaagccagggcagaggctaagacggcagaggctaagacggcagaatcg
aagtaa
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