Xenopus laevis (African clawed frog): 398710
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Entry
398710 CDS
T01010
Symbol
arhgef12.S, arhgef12, larg
Name
(RefSeq) Rho guanine nucleotide exchange factor 12 S homeolog
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04270
Vascular smooth muscle contraction
xla04625
C-type lectin receptor signaling pathway
xla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
398710 (arhgef12.S)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
398710 (arhgef12.S)
09153 Circulatory system
04270 Vascular smooth muscle contraction
398710 (arhgef12.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
398710 (arhgef12.S)
Membrane trafficking [BR:
xla04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
398710 (arhgef12.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
398710
NCBI-ProteinID:
NP_001082763
Xenbase:
XB-GENE-865525
UniProt:
Q6XS95
LinkDB
All DBs
Position
7S:67931377..68026781
Genome browser
AA seq
1450 aa
AA seq
DB search
MSGTQSAASDRFHSRKPTRHGSILYRESSTDKKQKVERSVSSSHDFDATESVSRKAKSTW
DESRQETYGLVQRCVVIQRDENGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVN
GTLVTHSNHLEVVKLIKSGSYVALTVQGRPLGSPTIPLTDSEADNFVPIMPPHSPVPQGH
GKGITSPILMEEENNIVHTQKLDILMKMLQKEQDQLHQFQEEFHTTPSQRLSKEIQDSKK
HIAQLQDGLSKARGLSQGSESLQISELDADSSDILGQTDCSSGDGSRPNSDIVDSPRSGQ
RDKSFLEESLEKSEIQDTDSQSSMGSPSIRFTHNIIGAEDDDFDAEPEQSPQINGQCSCF
QNMDLLKSHPAHLAVFIHHVVSQFDPAALLCYLHADLYQQTNSKETRRVFMEFNQFFLER
AANLKVPVPDDVALELEKRRPELIPEELHRQYIQTVQERLSEDVKKNLEDFKQKRSMGLT
LAEGELSKLDTERFRDRNTIDKERACAEQIVQKIEEILFTSQTPEDEKSNTIQYVILTYM
KHLGVKVKEPRSLEQKRGRIGFLPKIKQSMKKDREGEEKVKRRGFPSILAPQRKPSRQDS
NAIGKAMELQRQRHPKHLSTSSSSSPEPADGSRLRTSGGSIEGSDTPFSPSSNLGAAYTF
QEVGREVEGVSRCGGENMSSVDTLDGGTRTSGPIFDFPSPSLDHLHEEIGEADRLTDLGT
PKLLRKLDSVALSDIQSEDEHHEIDQEEHPPNWQQLVSKDTLQKLKPHEIKQQEVINELF
CTERAHVQKLSVLDQVFHQRVIRENLLTPAETRNIFSNLEEILQLHGALNEQMKAVKKRY
ETSVVEEIGDYVLNWFSGAEEEKLKQAVATFCSNQPFALEMIKSRQKKDLKFLAFVQDAE
SNPLCKRLQLKDIIPTEMQRLTKYPLLLDNIARYSDQEDEKEKVNKAANHCRNILDYVNQ
AVKEAENKQRLEDYQRRLDLSCLKPGEYPMIDELRNLDLTKRKLIHEGPLTWKVNKDKSI
DLYSLLLEDILVLLQRQDDKFNSEMRKQDLAATSESKHIFSPVIKLNTVLVRQVATDNKA
FFVISMSENGAQIYELMANSVSEKNGWQDLITSMAATSKTENSQPAQLQQTDPDLDSEEE
HEDQLKLSNDKEDERLLHRHRTDKDTESLVQPKSFSPSPTHGSILPHHAGILKDQNQQDF
RCSTSPSSCHPSTEHHLAVHALRNLGLLKQLLEQQLKFLQKEEEENFQRFCSHKTKEQNL
TRVSSLNKQNRGSRESDLNKDLHALHRAIDKGSEHGNTGPDCVAEILEESGEQFFDAQEP
HSDIYVDGSRREKHIEEAQFRSSENYLILDGYENVPESSTDDDLSASHYSNQGDPNDSLH
GEERLAFNALEPASSSEAFDQMLHYIETIESDLQQLKGLEDHYITYRNRVALSGVLEEDP
DKAMLPTDKG
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaacacagtctgcagcttcggacaggtttcactccagaaaaccaaccagacac
ggaagcatactttatagagagtcttcaactgacaagaagcagaaagtcgagagaagcgtt
agctcttctcatgactttgatgccacagaaagcgtgtccaggaaggcaaagtctacttgg
gatgagagtagacaggagacctatggtttagttcagcgctgtgtggtaattcaacgtgat
gaaaatggttttggtctgacagtcagtggtgataaccctgtctttgttcagtccgtcaag
gaagatggcgctgccatgcgagctggcgtgcagactggggatcggatcatcaaggttaat
ggcactctggtcacacactccaatcatttagaagtggtcaagcttataaagtctggctcc
tatgtagctcttacagtacaaggtcgtccacttgggtcacccaccatccctttaacagat
tctgaggcagataattttgttcccataatgccccctcattctccagtaccccaaggccat
ggaaaaggaattacaagcccaatacttatggaagaggaaaataacattgtacatacccag
aagctggatatactgatgaagatgctccagaaagaacaagaccaactacatcaatttcaa
gaggagtttcatactactccatcacagaggctttctaaggagatccaagacagtaagaag
cacatagcccaattgcaagacggattgtcaaaagccagaggtctttcacaaggctcggaa
tcattgcagatcagtgagctagatgcagactccagtgacatactgggacaaacagattgc
agcagtggggatggatcacggccaaatagtgacattgtagatagcccccgtagtggacag
cgagataaaagcttcctggaggaaagtctggagaaaagtgaaattcaggacacagactct
cagtcaagtatgggaagcccctctattcgcttcactcataatattattggcgcagaggat
gatgattttgatgctgaaccagagcagtccccacagataaatgggcaatgtagctgtttc
cagaatatggacctgttgaaatctcaccctgctcacttagcagtatttatacatcatgtg
gtctcccagtttgatccagcagctctgctgtgttacttgcatgcagacttataccagcaa
acaaattctaaagagactcgcagggtgtttatggagttcaaccagttcttcttagagcga
gcagcgaatcttaaagtccctgtcccagatgatgttgctcttgaattagagaaaagaaga
ccagagctgattccagaggagctgcatcgacaatacatccagactgtgcaagaaagactc
tctgaggatgttaaaaaaaacttggaggattttaagcaaaagcgcagcatgggactgacc
ctggcagagggagaactctccaaactggatacagagcgattcagagaccgtaatacaatt
gacaaggaaagggcctgtgcagagcagattgttcaaaagattgaggagattttgtttaca
tcacagactcctgaagatgaaaaaagcaataccatacagtatgtgatcctaacctacatg
aagcatcttggtgtcaaagttaaagagccacgaagtcttgaacagaaacgtggtcgaatt
ggattcctccccaaaattaagcaaagcatgaagaaggatcgggagggggaggaaaaggta
aagcggagaggatttcccagcatccttgcacctcagcggaaacctagccggcaagatagc
aatgcaattggcaaggctatggaacttcagcggcaacgccaccccaagcacttatccaca
tcttcatccagtagccctgaaccagcagatggaagtagattgcgaaccagcggtggctcc
attgagggttctgacacacccttctcgccatcatctaatttgggtgcggcctacaccttt
caggaagttggaagagaagtggagggagtttctagatgtggtggtgagaatatgtcatct
gtagatacccttgatgggggcactcgcacatctgggccaatatttgactttccatcacca
tcacttgaccacttacatgaagagattggtgaagcagaccggttaactgacctaggaaca
ccaaaactcctcagaaagttggacagcgttgctctaagtgacattcagagtgaggatgag
caccatgagatagaccaggaagaacatccacccaactggcagcagcttgttagtaaggac
accctgcagaaactgaaaccgcacgagatcaagcaacaggaagtcataaacgagctgttt
tgcactgaaagggcacatgtgcagaaactcagtgttttggaccaagtgtttcatcaacgc
gtgattcgtgaaaatctcttaactcctgcagaaacccgaaatattttctccaacttagaa
gaaatcttacaacttcatggtgcacttaatgagcaaatgaaagcagtaaagaaacgttat
gaaacatctgtggttgaagaaattggagactatgttctgaactggttcagtggagcagaa
gaggagaaactgaagcaggcagtggccaccttttgcagtaaccagccttttgctttagag
atgataaaatctcgccaaaagaaggatctgaaattccttgccttcgtacaggatgccgag
agtaatcctctatgtaagcgcctgcagttgaaggatattattcccactgagatgcagaga
ctaaccaagtatccacttctgctggataacattgcccgatattcagatcaagaggatgaa
aaagaaaaggtgaataaagcagcaaaccactgccgcaacatcttggactacgtaaatcag
gcagttaaagaggcagaaaacaagcagagactagaagattatcaacgcaggctggacctg
tcctgtttgaagccaggagagtatccaatgatagatgaactgaggaacctagatttgacc
aagaggaagttgatacacgaggggcctctgacatggaaggtgaataaagacaaatcaatt
gatctttactctctgctgctagaggacattttggttttacttcagagacaagatgacaag
tttaattctgagatgcgtaagcaagatctggctgcaacttcagagagcaaacatatcttc
agtcctgttatcaaactcaacactgtgctagtgcgacaggtggcaacagataacaaggca
ttctttgttatatccatgtcagaaaatggggcacagatttacgagctgatggccaattct
gtttctgagaaaaatgggtggcaagacctcataacaagcatggctgcaacatcgaagact
gaaaattctcagcctgctcagttacagcagactgacccagacctggacagcgaggaagaa
cacgaagatcagctcaaattgtctaatgacaaagaagacgaaagacttcttcataggcac
agaacagacaaagacactgaaagtttagttcagccaaaatccttttctccatcaccaaca
catggcagcatcctccctcaccatgcgggtattcttaaagatcagaatcagcaagacttc
agatgcagcaccagtccctcctcctgtcatccatctacagagcatcacctggcagtgcat
gcactgagaaacttgggactgctaaaacagttactggagcaacagctgaagttcctccag
aaagaggaagaagaaaactttcaacgattttgcagccataaaacaaaggagcaaaatctt
acaagggtttcaagcttgaataagcagaacaggggaagcagggagtctgacttaaataaa
gatctacatgctctgcacagggctatagacaaaggttctgaacatggaaacactggccca
gattgtgttgctgagatattggaagagagtggggaacagttttttgatgcacaggaacca
catagtgatatatatgtggatggctccagaagagaaaagcacattgaagaggcacaattc
agatcatcagaaaactacctgatactggatggctatgagaatgtgccagagagctccacg
gatgatgatctctctgcctcacactactccaaccaaggagatccaaacgattctttgcat
ggggaagagaggctggccttcaatgccctcgagcctgcatcatcttcagaggcttttgat
caaatgcttcattacattgaaaccattgaatcagacttgcagcagctcaaggggcttgaa
gatcattatatcacatatcgtaacagggtggctttgtcaggggtcttggaggaagatcca
gataaggcaatgcttcctacagataagggttaa
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integrated database retrieval system
