Xenopus laevis (African clawed frog): 398742
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Entry
398742 CDS
T01010
Symbol
ncapd3.L, cap-d3, hcp-6, ncapd3
Name
(RefSeq) non-SMC condensin II complex subunit D3 L homeolog
KO
K11491
condensin-2 complex subunit D3
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
398742 (ncapd3.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin II
398742 (ncapd3.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cnd1
HEAT
PDS5
HEAT_2
Adaptin_N
HEAT_EF3_N
Cnd3
TFCD_C
DUF3013
ISG65-75
R3H_PUS7L
Motif
Other DBs
NCBI-GeneID:
398742
NCBI-ProteinID:
NP_001083094
Xenbase:
XB-GENE-990935
UniProt:
Q6GN08
LinkDB
All DBs
Position
7L:69623995..69674561
Genome browser
AA seq
1492 aa
AA seq
DB search
MGDREAVLLEALSRCGLRGLSQAWVDSVWELDFTETEPLDSRIEAEITENGLETFSSLHE
NLLAFASEDPENSRSVWLLFSENDICRNSLVALLSHFIQAAANKKANAIQRILALNAAGL
YFLLLEIPGSVANQVFHPVLFDKSVNALEKCWPRDPNASRKRKKDTLKSSQGDNRGGRKR
PRPPRRDEQEMEDLSEEEQDEEEVYFSTRDLMHIRDSIFLVLKNFLRLLPKFSLKEKPQS
VLHCIQIFINLTSFESVPQEMPFSDAVSVNHMKYVPELAYHGLWLLCLPIHGEGNQTVRR
LFQRLLSVILMMKGGEGSNSALLVISPPVISARNQAIRFISFLVNELKEGTIPVLNILLQ
HICVKFPDKADYRVYAAQALVKLMENLPNAEYAIFIEWLYKYSKNSKISYRVFALEVVVA
LLDLPEREADVSLPHENLNFLQHKFLLQHMVFSRCSDKAPTVRSKALSCLAQCLEKNSTT
AIDGVQELLQGSSCRTVFGTNITETTGNGTVYASNANEATTHPQKTMATLKIIEVSDTGD
TLSSDGKEVLTMLRYRAGDEKTNVRKSALQVLVNVLKCHLIPCSSEDLSTLQDRCRDPAV
SVRKQALTSLTELLLAQPHSVLIQKAWLTGLIPVVLDTESSVQEKALECLDQLLLQSITH
YKRFKQDDERQKLTWDLLTLLTSESQDLSRYLTKAFHLWSKQDKFSSTFITNLISHTETE
HTAPAWMILSKVAGSSPKLDYTKILQSWERVSRQTDADINTTGHILCVIGHIAKHLPADT
RTHLIDHVKSWLKEFKSSPEVISPAVEALQKLCHAQTDKPEDVQDLLNDVCGEIVSACEH
HISSVVMADCKDEPLDQDLLVKHLFTLGEVAQLCPAKVEKRVLLLVQSILASSVTTEQNS
CHSDAEDPPVSQPLSQFKGSNMPSLIRAHAFITLGKLCLQHEDLAKKCIPALARELEVCD
DVAIRNNVIIVICDLCIRYTTMVDRYIPNVSVCLRDRDPFIRKQTLIMLTNLLQEEFVKW
KGSLFFRFVSVLVDPDPEIAKFGEFCLVHLLLKRNPVMFSQHFIECIFHFNCYEKHEKYN
KFAQTKRERTLFSLKGKENKDKRMKIYKFLLEHFTDEQRFNLTTKISHNVLACFVDGILP
IDMEANELLSDIFDIMSSKEIKLSAMRSKPGEDVGADDDEMAMANAVMQAAQKKLISQVQ
KKNFVENIIPIITSLKGFLEQHRIPAVRDLMNYLREMMQDYRDEIKDFFAADKQLAAELE
YDMKKYEEQLEREQEENVQNPPSAESTGSPKGSPRAVNAISSPRSPNAPKSPLSTNAQTP
GGAAPCTPITTPRVSILKGQGPRPRQMSLSTLAILNSARKAAQDNKKQRSKSIGAQPSTP
SPARTTSSKQVTFRSEDQQSDSSLVGRMISTPDVTIENVTFGAGVSYISASQTPLSGRRG
SIGSHEKERDVLCIMSPDKPAPQPRKWNVESPVQRRSIRQRISGKAPLKPSN
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacagagaagccgtgttgcttgaagccctgagccggtgcggactgcgtggtctg
agccaggcttgggtagattcagtatgggaacttgactttacagaaacggaacctttggat
tccagaatagaagcagaaataactgaaaatggattggaaacattcagtagtttgcatgag
aatttgttggcctttgcatcggaagatccggagaacagcaggagtgtatggcttctgttt
tctgagaatgacatttgtcgtaattcattggtggccttgctctcacacttcattcaagca
gcggctaataaaaaggccaatgccatacagaggatacttgcactaaatgccgcaggcctc
tactttctgctgctggaaattccaggcagtgttgccaatcaggtttttcatccagtgctg
tttgataagtctgtaaatgccctagagaaatgttggcctcgggatcccaatgctagtcgc
aaaaggaaaaaggacacgctaaagagttctcaaggggataatcgtgggggcaggaaaaga
cccaggcctcctaggagggatgaacaagagatggaggatttgtccgaagaagaacaagat
gaggaagaagtgtatttctcaactcgtgatctcatgcatattcgagattctatatttctc
gtgctaaagaactttttgcgtcttctacccaagttctctctcaaagagaaacctcaaagt
gtgctgcattgtattcagatcttcataaatttgactagttttgagagtgtcccacaggag
atgcccttttctgatgccgtctctgttaaccacatgaagtatgttcccgaacttgcatac
catggcttgtggttgctctgtttgcccattcatggggaagggaatcagacagtgcgccgc
ctttttcagcgcttactcagtgtcatcctgatgatgaaaggaggagaaggttctaattca
gcccttttggtcattagtcctcctgttattagtgcaagaaatcaagctattcgatttatc
agttttttggtgaatgagctgaaagaaggtacaatccccgtgctgaacattttactgcaa
catatttgtgtgaagtttccagataaggcagattacagagtttatgctgctcaggctttg
gtaaaactaatggaaaatcttcccaatgcagaatatgccattttcatagaatggctgtac
aagtactcaaagaattctaagatctcttacagagtgtttgcacttgaagtggtggttgct
ttgctagatctaccagaaagagaggcagatgtttccttgcctcatgagaacttaaatttt
ctgcagcataaattcctgttacagcacatggtattcagccgttgctctgacaaagctccc
actgtccgcagtaaagcactttcctgcctagctcagtgcctggaaaagaacagcaccact
gccatagatggagtgcaagagctgctgcagggcagttcttgccgcactgtatttggtaca
aatatcacagaaaccacagggaatggcacagtgtatgcatcgaatgccaatgaagctaca
acacatcctcagaaaaccatggctactttaaaaatcattgaagtttcagacactggtgat
accctaagttctgatggaaaggaggtgttaacaatgctgcgctatagagcaggagatgag
aagacaaatgtgaggaaatctgcattgcaggttctggtgaacgtgctaaagtgccatttg
attccctgcagttcggaagatctttctacacttcaagacagatgcagggatcctgcagta
tctgtgcggaagcaggcattgacttccttgactgagctgcttctggctcagcctcacagt
gttttgattcagaaagcctggttgactgggctgattcccgtggttctagatacagaaagc
tctgttcaggaaaaagcccttgaatgtcttgaccaacttctgctacaaagtattacacat
tataagcgcttcaaacaagatgacgagaggcaaaaattaacatgggacttgctgacactt
ctcacttcggaaagccaagaccttagccgttacctgacaaaggcctttcacttatggtca
aaacaagataagttttcatcaactttcattactaatcttatctctcacacggagactgaa
cacactgctcctgcatggatgatactgtctaaagttgcaggctcctcaccaaagttggat
tacaccaaaattcttcagtcttgggagcgtgtcagcagacaaacagatgcagacatcaac
accactgggcacattttgtgtgtaattggtcacatcgctaagcacctccctgcagacact
aggacacacttaatagatcatgtaaagtcctggttaaaagaatttaagtcttcaccagaa
gtgataagtcctgcagtggaagctttgcagaaactctgccatgcacagactgataaacca
gaagatgtgcaggatcttttgaatgatgtatgcggtgagatcgtctcagcttgtgaacat
cacatctcatctgttgtaatggctgattgcaaagatgaaccccttgaccaagatttactg
gtaaaacacctctttactcttggggaagttgcccagctctgccctgcaaaggtggagaaa
cgtgtcttgctgctggttcaatccatattggcctcatctgtaaccacagaacaaaattcc
tgccattccgatgctgaggatcctccagtttcccaaccactctcacagttcaaaggttcc
aacatgccttctctgatcagggctcatgctttcataacactcggaaaactctgtctacaa
cacgaagatctggctaaaaaatgcattcctgcacttgccagagagcttgaggtttgcgat
gacgtggccattcgcaacaatgttattattgtgatatgtgacctgtgcatccgttacact
acaatggtggataggtacattcccaatgtttccgtctgccttcgagacagagaccccttc
atccgcaagcaaactcttatcatgctgaccaaccttctgcaggaagaatttgttaaatgg
aaaggctcactcttcttcagatttgtcagtgtgctagtggatcctgacccagaaatagcc
aagtttggggagttttgtctggttcatctgctcctgaagaggaatcctgttatgttttct
cagcattttatagaatgtatattccatttcaactgttatgagaaacatgagaagtacaat
aaatttgcacagacaaaaagggagaggacccttttctctctgaagggcaaagagaacaag
gacaagcgaatgaagatctataagttcctcctggagcacttcacagatgaacagagattt
aacttgaccaccaagatcagccataatgtattagcatgctttgtggatgggattttacct
attgatatggaagccaatgaattgctgtctgacatttttgacataatgagcagtaaagaa
attaagctatctgcgatgagatcgaaacccggagaagacgttggtgctgatgatgatgag
atggcaatggctaatgcagtaatgcaggcagcacagaaaaaacttatctctcaggtgcaa
aagaagaactttgttgagaacattattcccattataacttcactgaaggggttccttgag
cagcaccggattcctgctgtgagagatctcatgaactatttgcgggagatgatgcaggac
tatcgggatgagattaaagacttttttgctgcggataagcaactagccgcggaactggaa
tacgatatgaaaaagtatgaggagcaactggaaagagagcaagaggaaaatgtgcagaat
cccccttctgctgaaagcactggatccccaaagggttcccctagagccgtcaatgcaatt
tcatctccaagaagtcctaatgcaccaaaatctcccctctccactaatgcacaaacacct
ggaggggctgcaccgtgtacccctataacaacacctagggtcagcatattgaagggtcag
gggcctaggccaaggcaaatgtcactcagtaccctggcaattcttaattctgcaagaaag
gctgcgcaggacaacaagaaacagagaagcaagagcattggagcacaaccctcaactcct
tcaccagcgagaacaactagcagcaaacaagtgacgttccgtagtgaagatcagcagtcg
gatagttctctggttggaagaatgatcagtacccctgatgtgaccattgaaaatgtaaca
tttggagctggggtcagctacattagtgcaagccaaacaccactctcagggagaagagga
agcatcggatcccacgagaaggaaagagatgtactgtgcattatgtctcctgacaaaccg
gccccccagcctcgaaaatggaatgtggaatctccagttcagagaagaagcatccgccag
cgcatttctggaaaagcaccactaaagccatctaactag
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integrated database retrieval system
