Xenopus laevis (African clawed frog): 398749
Help
Entry
398749 CDS
T01010
Symbol
myo1d.L, myo1d, myosin-1d
Name
(RefSeq) unconventional myosin-Id
KO
K10356
myosin I
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
398749 (myo1d.L)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xla01009
]
398749 (myo1d.L)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
398749 (myo1d.L)
03036 Chromosome and associated proteins [BR:
xla03036
]
398749 (myo1d.L)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
398749 (myo1d.L)
04147 Exosome [BR:
xla04147
]
398749 (myo1d.L)
Protein phosphatases and associated proteins [BR:
xla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
398749 (myo1d.L)
Membrane trafficking [BR:
xla04131
]
Endocytosis
Phagocytosis
Others
398749 (myo1d.L)
Others
Actin-binding proteins
Myosins
398749 (myo1d.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
398749 (myo1d.L)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
398749 (myo1d.L)
Exosome [BR:
xla04147
]
Exosomal proteins
Proteins found in most exosomes
398749 (myo1d.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
nSTAND3
AAA_16
Sigma54_activat
AAA_18
AAA_22
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
398749
NCBI-ProteinID:
NP_001083106
Xenbase:
XB-GENE-5877264
UniProt:
Q6GPA1
LinkDB
All DBs
Position
9_10L:complement(5769671..5814613)
Genome browser
AA seq
1007 aa
AA seq
DB search
MAEQEGLQYGKADFVLMDSVTLPEFMENLKLRFEKGRIYTFIGEVVVSVNPYKNLPIYGR
DTIEQYKGRELYERPPHLFAIADAAYKAMKRRCKDTCIVISGESGAGKTEASKYIMQYIA
AITNPSQRAEVERVKNMLLKSNCVLEAFGNAKTNRNDNSSRFGKYMDINFDFKGDPIGGH
ISNYLLEKSRVIVQQLGERNFHSFYQMILGAPEQTLRSLHLQRDISSYAYTRSLAQLKSS
NNDAGDFKEVAEAMKVIGFKPEEIQTVYKILAAILHLGNLKFIVDGDTTLIENGKVVSVV
AGLLGTRSEQVEKALLFRTVATGRDVIDKQHTEKEANYGRDAFAKAIYERLFCWIVNRIN
DVIDVKQQDASLHGKNTVIGVLDIYGFEIFDNNSLEQFCINYCNEKLQQLFIQLVLTQEQ
AEYQREGIPWKHIDYFDNQIIVDLVEQQHKGIISLLDDACMNVGKVTDDMFLEALNKQLG
KHAHYSSRKVCATDKALEYNRDFRIRHYAGDVVYSVVGFIDKNKDTLFQDFKRLMFNSSN
PVLKTMWPEGKLSITEVTKRPLTAATLFKNSMIALVDNLASKEPYYVRCIKPNEKKSPAL
FDEVRCRHQVEYLGLLENVRVRRAGFAYRQVYDKFLHRYKLISSLTWPNHSLPSDRIAVE
RFMVDCGLNHDAAYGKTKIFIRTPRTLFSLEERRSEMLIRIILFLQKLWRGTLARRRCKR
IRAGLTILRYYRRYKVKSYLREVMHRFNGVKNSRDYGKHVKWPTPPRVLRRFQEALQNIY
NRWRGYQIIKSLPPAEIPKVRAKVAAFENLKGHRVDMGLQRCWEGSYLASNQENARNSNQ
FVSRSNELQRKDKFMQALFSCHVQKVNRFNKVQDRAIFITDRHLYKMDPGKEYKVMTSTP
LYNVSGISVTSGKDQLVVFHMKDNKDLIVCLGCSGQGPYDSRIGELVGVLANHFKSERRP
LQVTVSHPIQCRQHGRSCSITVETKINQSQPQFTKNRAGFTLSVPAN
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacaagaggggctgcagtatgggaaggcggattttgttcttatggactcggtc
accttaccggaattcatggagaacctaaagctcaggtttgagaagggccgaatatataca
tttattggggaggtggtggtgtcagtaaatccgtacaagaacctgcctatctatgggaga
gataccatcgagcagtataaagggagggagctgtatgagagaccaccccatctttttgcc
attgcagacgctgcctacaaagctatgaagagacgatgcaaggatacatgtatagtcata
tcaggggagagtggagctggcaagacagaagccagtaagtacatcatgcagtacattgct
gcaatcaccaaccccagccagagagcagaggtggagagggtgaaaaacatgctgctgaaa
tccaactgcgtcctggaggcttttggaaatgccaagacgaatcgtaacgacaactccagt
cgctttgggaaatatatggatataaactttgacttcaagggagaccccatcggggggcac
atcagtaactacttactggagaagtctcgagttattgtgcagcaactgggtgagaggaac
ttccactccttttatcagatgattctaggtgcccccgagcagacccttcgctccctccac
ctacagagggatatctcttcatacgcctacacccgctctcttgctcagctcaagtcttct
aataatgatgcgggagattttaaagaagtcgctgaggccatgaaagtgattgggttcaag
ccagaggagattcagacagtgtacaaaattctggctgccattctacacctggggaatctc
aagttcattgtggacggggacaccactctaatagagaatggcaaagtcgtttcagtagtg
gcaggccttctgggcactaggtctgagcaagtagagaaagcccttctcttccgaacggtg
gccacaggaagggatgtaatagacaagcagcataccgagaaggaagccaattatggcaga
gatgcttttgccaaggccatctatgaacgcctcttttgctggattgtgaatcggataaat
gatgtaattgacgtgaaacagcaggatgcctctctgcatggaaagaacaccgtgatcggt
gtactggatatatacggctttgaaatttttgataacaacagcctagagcaattttgcata
aattattgcaatgagaagctacagcaactgttcatccaacttgtattaacccaggagcag
gcagaatatcagagagaggggataccctggaaacatattgactattttgataaccagatc
attgtggacctggtggagcagcagcacaaagggatcatttctttgctggacgacgcctgt
atgaatgtcgggaaggtgacggacgacatgttcctggaagctctgaacaaacagctcggg
aaacacgcgcattactcgagcaggaaggtctgtgctacagataaagcgctggagtataac
cgagacttccgaatccgtcattacgctggagatgtggtttactctgtggtgggatttatt
gataagaacaaggacacgcttttccaggatttcaagaggctgatgtttaacagctccaac
ccagttctgaagaccatgtggccagaagggaagctcagcatcacggaggtcaccaagcga
ccacttacagcagccacgctcttcaaaaactccatgattgctctagtagataacctggca
tccaaggaaccgtactacgttcgctgtattaaaccaaacgaaaagaagtctcccgctcta
ttcgatgaggtgaggtgtaggcaccaagtggaatacctgggtttgctggagaatgttcgg
gtccgaagagccggatttgcatatcgccaagtgtacgacaagttcctccacaggtacaag
ttaatatcgtctctgacctggccaaaccacagcctgccttcagatcgtatagctgtggaa
agattcatggtcgactgcggcctcaaccacgatgcggcttatggcaaaaccaagatcttc
atccgcacgccgcgcaccttgttttccctggaggagaggcgcagtgagatgctcatcaga
atcatcctctttctgcaaaagctatggagggggacacttgcacgccggcggtgtaagagg
attcgtgcaggcctcacaatccttcgctactacagacgctacaaggtgaagtcttacctg
cgtgaggtcatgcacaggttcaacggagtaaagaacagtcgagactatggcaaacacgtg
aaatggcctactccacccagggtgctgcggcgcttccaggaggccctgcagaacatctac
aacagatggagagggtaccagataatcaagagcttgcctccagcagaaatacccaaggtc
agggctaaagtcgctgcctttgagaaccttaaagggcacagagtggatatgggacttcag
agatgctgggaaggaagctacttggcctcgaatcaagagaacgctcgcaattctaaccag
tttgtttctcgctccaatgagctccaaagaaaggacaagttcatgcaggcactgttctcc
tgccatgtgcagaaggtcaaccggtttaacaaggtacaagatcgcgccatctttatcaca
gaccgacacttatataagatggatcctgggaaggagtataaagtaatgaccagcactcca
ctttataatgtgtctggcattagtgtgaccagtgggaaggatcagctggttgtcttccac
atgaaggataacaaagacctcattgtgtgcctgggatgttctggccaaggcccttacgac
agccgcataggggagctggttggagtcctggcaaaccatttcaaaagtgagaggaggccc
ctgcaggtgacagtatcgcacccaatccagtgcagacagcacggccggtcctgctcaatt
acggtggaaaccaagatcaaccagtcacagcctcagttcaccaaaaaccgtgcaggtttc
acactcagtgttccagccaattaa
DBGET
integrated database retrieval system
