Xenopus laevis (African clawed frog): 398826
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Entry
398826 CDS
T01010
Symbol
irf1.L, irf1
Name
(RefSeq) interferon regulatory factor 1 L homeolog
KO
K09444
interferon regulatory factor 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
398826 (irf1.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
398826 (irf1.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
398826 (irf1.L)
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Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
398826
NCBI-ProteinID:
NP_001083250
Xenbase:
XB-GENE-6255163
UniProt:
Q6PB00
A0A974DDE0
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Position
3L:43703556..43712318
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AA seq
298 aa
AA seq
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MPVTRLRMRPWLEEQINSNKIPGLSWINKDKMIFQIPWKHAARHGWDINKDACLFRSWAV
HTGRFKSGEKETDPKTWKANFRCAMNSLPDIKEVKDKSIYKGSSAVRVYQMFTPQIKAEK
KERRSKAKCSKSKAKYKTEEDEESVKTSPLPVDHSYTANVYTDQEDMDSVDAAVMSLNES
VSSTLDWDSQLEMPLPDSTNNLYPFQVSPLSSSSEEEEDFPDDFLRMMLEPSTEWQQTSI
DGKGFFTNESGMQNACLTEISSAFDGTLSGEIKVRFSTDLINWPDYSSRATGLAVPTF
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgacacgtttaaggatgaggccatggctagaggagcagataaactccaacaaa
atccctggattgtcatggatcaacaaggataaaatgatattccagatcccttggaaacat
gctgctagacatggatgggacatcaataaagatgcctgccttttccggagttgggctgtc
catacaggacgttttaaatctggcgagaaggagaccgaccctaaaacttggaaggccaat
ttccgatgcgcaatgaactctctgccggatataaaagaagtcaaagacaaaagcatatac
aaaggctccagtgcagtgcgagtatatcagatgttcacacctcaaataaaggctgagaag
aaagagcgcagatccaaggcaaaatgctctaaaagcaaagccaagtataagactgaggaa
gacgaggaatctgtaaaaactagcccattgcctgtagaccacagctacactgctaatgta
tatacagaccaagaagacatggattctgtggatgcagctgtaatgagcctcaacgaaagt
gtctctagcaccttggactgggactctcaacttgaaatgccattgcctgacagcacaaat
aacctctaccctttccaggtgtcacccttgagttcatcttcggaagaggaagaagacttt
ccagacgactttcttaggatgatgttagagccaagcacagaatggcagcagacaagcata
gatggcaaagggtttttcaccaatgaatctggtatgcagaacgcctgtctaactgaaata
agctctgcattcgacggcacgttatcaggtgaaataaaagtcagattctccacagacttg
atcaactggcccgactattcctcaagggctacaggattagctgtccccactttttga
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