Xenopus laevis (African clawed frog): 398842
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Entry
398842 CDS
T01010
Symbol
hnf1b.L, hnf-1beta, hnf1-beta, hnf1b, hnf1beta, lfb3, nopr01, tcf2, vhnf1
Name
(RefSeq) HNF1 homeobox B L homeolog
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
398842 (hnf1b.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
398842 (hnf1b.L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
HTH_5
Motif
Other DBs
NCBI-GeneID:
398842
NCBI-ProteinID:
NP_001083280
Xenbase:
XB-GENE-485656
UniProt:
Q6PAX5
A0A974DM92
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All DBs
Position
2L:65075613..65099572
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AA seq
561 aa
AA seq
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MVSKLSPLQQELLNALLNSGVTKEDLIQALEDMIPSPSFGVKLENLHMSPEHEVDSKPVF
HTLTNGHHHKGKLSGDEGSEDGDDFDTPPILKELQSLNTEEAAEQRAEVDRMLSEDSWRA
AKMIKGYMQQHNIPQREVVDITGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREILR
QFNQTVQGSENITDKSSQDQLLFLFPEFNQQNQVQGQPDDTCSEPSNKKMRRNRFKWGPA
SQHILYQAYERQKNPSKEEREALVEECNRAECLQRGVSPSKAHGLGSNLVTEVRVYNWFA
NRRKEEAFRQKLAMDAYSTGPSHPHNLNSLLSHGSPHHTQPSTSPPSKLQGLRYSQQGNN
EVTSSSTISHHGNNAMVTSQSILQQVSPVCLDHSHSMLSPDGKLISVSGGGLPPVSTLTN
IHNLSQSVHHNPQQSQNLIMAPISGVMAITQNLNTSQAQSVPVINSVAGSLAALQSVQFS
QQLHSPHQQQIMQQSPGHMAQQPFMATVTQLQNSHMYAHKQEPPQYSHTSRFPSAMVVTD
TSSISTLSNMSSSKQCPLQAW
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccaagctatcgcctttgcagcaggaactcctcaatgctctcctgaactctgga
gtaaccaaagaggatttgatccaggccttggaagatatgatccccagcccaagctttggg
gtaaagctggagaacttgcacatgtccccggaacatgaggttgacagtaagcccgtattc
cacactcttactaatggccaccaccacaagggcaaactctccggggatgagggctcagag
gatggagacgactttgatacccctccaatccttaaagaactgcagtcccttaatacggag
gaggcagctgagcaaagggcagaagtggacaggatgctaagcgaggattcatggagggct
gcaaaaatgataaagggttacatgcaacaacacaacattcctcagagagaagtggtggat
atcactggcttaaaccagtcccatctctcccaacacttaaacaaaggaacaccaatgaag
acccaaaaacgtgctgcattgtacacttggtatgtgaggaaacaaagggagatattaaga
caattcaaccagacagtccagggttctgaaaatatcacagacaaaagcagtcaggatcag
ctgctgtttctctttccagagtttaatcagcaaaatcaagttcaaggacagcctgatgat
acctgctcagagccttccaacaagaagatgagacgaaatcgtttcaaatgggggcctgca
tcacagcatattctttatcaagcctatgaaaggcaaaagaatcccagcaaagaagaaaga
gaagctttagtggaagaatgtaacagagcggaatgtcttcagcgtggtgtatctccatct
aaagctcatggccttggatcaaatttggtaacagaagtccgtgtttataactggtttgca
aacagaaggaaagaagaggcttttcgacaaaaactggctatggatgcctatagtactggc
ccatcacacccccacaacttgaattctctactatcacatggatcaccacaccatacacaa
ccaagcacttctccaccaagtaaactgcaagggctgagatatagtcaacaaggaaacaat
gaagtcacttcatcatcaactatcagtcaccatggcaacaatgctatggtgaccagccaa
tctattttacagcaagtttctccagtgtgcttggatcacagccacagcatgctttcacct
gatggcaaactgatatctgtttctggaggaggattaccgccagtgagtacgctgacaaat
attcacaacctatcccagtctgttcatcacaatccacagcaatctcaaaaccttatcatg
gcaccaatctctggggtgatggcaatcacacagaatttaaacacctctcaggcacaaagt
gtacctgttatcaacagtgtagcagggagccttgcagctttacagtctgtacagttttca
cagcaactacacagtccacatcagcagcaaatcatgcaacagtctccggggcatatggca
cagcagccatttatggcgactgtgactcagctacagaattcacacatgtatgcgcacaag
caagagcctccccagtattcccacacatctcgttttccttcagccatggttgtcacagat
actagcagcatcagcacattatccaacatgtcttccagtaaacagtgtcctttgcaagca
tggtga
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integrated database retrieval system
