KEGG   Xenopus laevis (African clawed frog): 398880
Entry
398880            CDS       T01010                                 
Symbol
rab7a.L, rab7, rab7a
Name
(RefSeq) RAB7A, member RAS oncogene family L homeolog
  KO
K07897  Ras-related protein Rab-7A
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04137  Mitophagy - animal
xla04140  Autophagy - animal
xla04144  Endocytosis
xla04145  Phagosome
xla04148  Efferocytosis
xla05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:xla00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    398880 (rab7a.L)
   04145 Phagosome
    398880 (rab7a.L)
   04140 Autophagy - animal
    398880 (rab7a.L)
   04137 Mitophagy - animal
    398880 (rab7a.L)
   04148 Efferocytosis
    398880 (rab7a.L)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    398880 (rab7a.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xla04131]
    398880 (rab7a.L)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xla04147]
    398880 (rab7a.L)
   04031 GTP-binding proteins [BR:xla04031]
    398880 (rab7a.L)
Membrane trafficking [BR:xla04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    398880 (rab7a.L)
Exosome [BR:xla04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   398880 (rab7a.L)
  Exosomal proteins of other body fluids (saliva and urine)
   398880 (rab7a.L)
  Exosomal proteins of colorectal cancer cells
   398880 (rab7a.L)
  Exosomal proteins of bladder cancer cells
   398880 (rab7a.L)
GTP-binding proteins [BR:xla04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    398880 (rab7a.L)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase cobW ATP_bind_1 Septin nSTAND3 PduV-EutP AAA_16 AAA_22 AAA_24 AAA_7 AAA_5 NTPase_1 FLYWCH_N G-alpha ATPase_2 NB-ARC SRPRB NACHT AAA_14 ATP-synt_ab
Other DBs
NCBI-GeneID: 398880
NCBI-ProteinID: NP_001083352
Xenbase: XB-GENE-483568
UniProt: Q6PA99 A0A974HQ54
LinkDB
Position
4L:135714926..135748384
AA seq 207 aa
MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
VVLGNKVDLENRQVTTKRAQVWCHSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV
ELYNEFPEPIKLDKNDRAKASAESCSC
NT seq 624 nt   +upstreamnt  +downstreamnt
atgacgtccaggaagaaagtgctgctgaaggtcatcatcctcggggattctggggttggc
aagacctctctcatgaaccagtatgtgaataagaagttcaccaaccagtacaaagccact
ataggggcagattttctcactaaggaggtgatggtggatgacagattggtcacaatgcag
atctgggacacagctgggcaggaaaggttccaatccctgggggtcgctttctaccgaggg
gccgactgctgcgtgttggtctacgacgtcacggctcccaacactttcaagactctggac
agttggagagatgaattcctcatccaggcgagtccaagggacccggagaactttccgttt
gttgtgctgggaaataaggtagaccttgagaacagacaagtaaccacaaagcgagcacag
gtgtggtgccatagcaaaaacaacatcccatattttgaaaccagtgcaaaggaagctatc
aatgtggaacaggcttttcagacgatcgcacggaatgcacttaaacaggagaccgaggtg
gagctgtacaacgaattcccagaacccatcaaattggacaaaaatgacagagcaaaggcc
tctgctgagagctgcagctgctga

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