Xenopus laevis (African clawed frog): 398900
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Entry
398900 CDS
T01010
Symbol
fubp3.S, fubp3
Name
(RefSeq) far upstream element binding protein 3 S homeolog
KO
K13210
far upstream element-binding protein
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
398900 (fubp3.S)
03041 Spliceosome [BR:
xla03041
]
398900 (fubp3.S)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
398900 (fubp3.S)
Spliceosome [BR:
xla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
398900 (fubp3.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
FUBP_C
TrbL_3
Motif
Other DBs
NCBI-GeneID:
398900
NCBI-ProteinID:
NP_001083390
Xenbase:
XB-GENE-866180
UniProt:
Q6PAA0
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All DBs
Position
8S:33843009..33892470
Genome browser
AA seq
546 aa
AA seq
DB search
MAELVQGQSAAPVGIKAEGFADALHRVRQIAAKIDGIPHLNNSGPLVDASLYGYGVQKRP
MDDPVGNQLGALVHQRAVMTEEYNVPDKMVGFIIGRGGEQISRIQAESGCKIQIAPDSGG
MPERPCVLTGTPESIEQAKRLLGQIVDRCRNGPGFHNDMDGSSTVQEILIPASKVGLVIG
KGGETIKQLQERTGVKMIMIQDGPLPTGADKPLRITGDPFKVQQARDLVLEIIREKDQAD
FRGIRSDFSSRIGGGSVEVSVPRFAVGIIIGRNGEMIKKIQNDAGVRIQFKPDDGLSPER
VAQVMGLPDRCQHAAHIINELILTAQERDGFGGLSLARGRGRSRGDWNLSTPGSMQEINY
TVPADKCGLVIGKGGENIKNINQQSGAHVELQRNPPPNTDPAVRIFTIRGVPQQIELARH
LIDEKVGGTTIGGPSSFGQSAFSQAHATPHQNGPQAFVTQGWGSTYQAWQQTAQQIQGPQ
SQQQNAQPDYSKAWEEYYKKQNQAASATSQASSQPDYTMAWAEYYRQQAAYYGQSLGQTH
SHNQEQ
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagagctggtgcaaggacagagcgcggctcctgtagggataaaggccgagggattc
gccgacgcgctgcaccgggtccgacagatagctgctaaaattgacggaatcccccacttg
aataattccggacctttagtggacgcatctttgtatggttatggagtccaaaagagaccc
atggatgatcctgttggtaaccagttaggggccctcgtacatcaaagggctgtgatgacc
gaggaatataatgtgcctgacaagatggtgggattcattattggacgaggtggggagcag
atctcacggatccaagcagaatctggttgcaagatacagatagctccagacagcggaggt
atgccagagagaccttgtgtcctgaccggaacaccggaaagtatagaacaggcaaaacga
ctcctgggccagattgtggatcgttgtcggaatggaccagggttccacaatgacatggac
ggcagcagcacagtccaggagatcctcatcccggcttcaaaagtgggcctagtcatcggc
aaaggcggggaaaccatcaaacagctgcaggagaggactggtgttaaaatgatcatgatc
caagatggtcctttaccaactggtgcagacaagcctctgaggataactggtgaccctttc
aaagtgcagcaagcaagagatctggtcctggagatcatccgagaaaaagaccaggctgac
ttcaggggcatccgaagtgatttcagctcaaggattggtgggggtagcgtagaggtgtct
gtacctaggtttgctgtgggaatcataataggaagaaatggtgaaatgataaaaaagatc
cagaatgatgctggagtgaggattcagtttaagccagatgatgggctcagccctgagcga
gtggcacaggtaatgggcctccctgaccggtgtcagcatgctgctcatatcatcaatgaa
cttattcttacagcacaggaacgtgatggctttggaggtctctccttggcacggggaagg
ggacggagccgtggtgattggaacctcagtaccccaggaagcatgcaagagatcaactac
actgtgccggccgacaaatgtggtctcgtgattggcaaaggtggtgaaaatatcaaaaat
ataaaccagcagtcaggggctcatgtggagctacagagaaacccccctcccaacacagac
ccagctgtcaggatatttaccatccggggtgtcccccagcagattgagctggccaggcat
ctcatcgatgagaaagttgggggtactacaataggtggccccagcagctttggtcagagt
gctttcagccaggcacatgctacacctcatcaaaatggtcctcaagcttttgtaacacag
ggttggggtagcacttaccaggcatggcagcaaactgcacagcagatccaaggtccgcaa
agccagcagcaaaatgcacagcccgattacagcaaggcctgggaagagtattacaagaag
cagaaccaggctgccagcgccacttcccaggcaagttcacaaccagactatacgatggca
tgggctgagtattataggcaacaggccgcttattatgggcagtcactggggcagactcat
tctcacaaccaggagcagtag
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