Xenopus laevis (African clawed frog): 398937
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Entry
398937 CDS
T01010
Symbol
stau1.S
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X6
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xla01009
]
398937 (stau1.S)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
398937 (stau1.S)
Protein phosphatases and associated proteins [BR:
xla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
398937 (stau1.S)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
398937 (stau1.S)
mRNA cycle factors
Stress granule specific factors
398937 (stau1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Staufen_C
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
398937
NCBI-ProteinID:
XP_018093626
Xenbase:
XB-GENE-17331320
UniProt:
A0A8J0TRQ0
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All DBs
Position
9_10S:complement(7695887..7714699)
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AA seq
579 aa
AA seq
DB search
MFTVQLTLGDQYWEAEGTSIKKAQHAAAAKALEGTKYPKPTVRPVCGERKYPDSITPTVE
LNALCMKLGRKPVYKPLDPYTGVRSAYNYNMRGGGYPPRYFYPFPVAPILYQVELSVGGQ
QFHGKGRTRQAAKHDAAAKALKSLQHEPLPDKPVVNGTLADEENLNKSEISQVFEIALKR
NMSVNFEVTKETGPPHMKSFVTKVIVGEFLGNGEGKSKKISKKNAAIAVLEELRKLPSLP
TVEKMKPKIKKKTKSIVKLPTSPEYGQGMNPISRLAQIQQAKKDKEPEYILITERGLPRR
REFVMQVKVGNHTAEGTGTNKKVAKRNAAENMLELLGFKVPPPPPKPALKTEEKLPVRKP
GDGRKVTFYEPGSGEDTANNHKDDEFRMPFHSHQQLPAGILPMVPEVAQAVGVNQGLHTK
DFNRVAPNPAKATVTAMIARELLYAGISPTADAILKNNNTAGPFTRPSEQLNYLSRVQEL
EVEYKDFPKNNKNEFVSLINCSSQPPLISHGICKDLESCHDMAALNILKLLSELDQHNAE
MPRTGNGPMSVCVKPEIERDPLLKPANSNTLGQTLDSTA
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgttcacagtgcagctcactctaggggaccagtactgggaggccgaagggacgagtatt
aaaaaagctcaacatgcagctgctgccaaagccttggaagggacaaagtacccgaagcct
acagtccgccctgtctgtggtgagagaaaatacccagacagcatcacgccaacggttgaa
ctgaacgctctgtgcatgaaactaggaaggaaacccgtatacaaacctttagatccctac
actggggtgcgctcggcttataactacaatatgcgaggaggcggctaccccccacggtac
ttctacccgttccctgtggctcccatcctctaccaagtggaactgtccgtgggagggcag
caattccacgggaaagggaggacaagacaagccgccaagcacgatgctgcagccaaagca
ctaaagagcctccaacacgagcctctccctgacaaacctgtggtgaacgggacattggcc
gatgaagaaaatctaaataagtctgaaataagccaagtgtttgaaattgcacttaaacgg
aacatgtctgtgaattttgaggtaaccaaggaaactggccctccccacatgaagagtttt
gtaactaaagtcatagttggtgaatttctgggcaatggcgaaggaaagagcaaaaagata
tcgaagaagaatgcggctatagccgtgctagaggagctccgcaaactgccctcacttccg
acagttgagaaaatgaagccaaaaatcaaaaagaaaacaaagtccatcgtaaagcttcct
actagtcctgaatatgggcaagggatgaacccaatcagcaggctggcacagattcagcaa
gccaagaaagataaagaacccgaatatattctgatcacagagaggggtctcccgaggcgc
agagagtttgtcatgcaggttaaagtaggaaatcatacggctgaaggcacgggcactaac
aagaaagtcgccaaaaggaacgctgctgaaaatatgttggaactcctaggatttaaagtc
cctccacctcccccgaaacctgcactcaagacagaagaaaagctccctgtaaggaaacca
ggagatggaaggaaagtgaccttttatgagcccggatcaggagaagatactgctaacaat
cacaaagatgacgagttccggatgccttttcacagccatcagcagcttcctgcgggaatt
ctccctatggtccctgaggttgcacaagcggtgggggttaatcaaggacttcacaccaaa
gactttaacagggtggcccccaacccagccaaggcaacggtgacggccatgatagcgaga
gagctgctgtatgccggcatctcacccacggctgacgccattctgaagaataacaacact
gccgggccatttactcggccctctgagcaattaaattacctgtctagagtccaagaatta
gaggttgaatataaagacttcccgaagaataataaaaacgagtttgtctctctcataaac
tgttcctctcagccgccattaatcagccacggcatctgcaaggacctggagtcctgccac
gatatggctgcgttgaacatcttgaaattgctgtcggagctcgaccaacataacgcggag
atgcccagaacagggaatggaccaatgtcagtatgtgtcaaacccgaaatagaacgtgat
cctctcctgaaaccggccaactcaaacaccttgggacaaacactggacagtacagcctga
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