KEGG   Xenopus laevis (African clawed frog): 398938
Entry
398938            CDS       T01010                                 
Symbol
wdtc1.S
Name
(RefSeq) uncharacterized protein LOC398938
  KO
K11807  WD and tetratricopeptide repeats protein 1
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xla04121]
    398938 (wdtc1.S)
Ubiquitin system [BR:xla04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     398938 (wdtc1.S)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WD40_Gbeta WDR55 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st TPR_19 WD40_MABP1-WDR62_2nd TPR_2 Beta-prop_WDR75_1st ANAPC4_WD40 TPR_1 Beta-prop_WDR90_POC16_2nd TPR_16 Beta-prop_WDR41 WD40_RFWD3 NBCH_WD40 TPR_BSK1_C TPR_11 ANAPC3 Beta-prop_EIPR1 TPR_14 Beta-prop_Aladin Beta-prop_HPS5 TPR_17 Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_WDR19_1st TPR_9 Beta-prop_SCAP Barstar Beta-prop_VPS8
Other DBs
NCBI-GeneID: 398938
NCBI-ProteinID: NP_001083459
Xenbase: XB-GENE-17339722
UniProt: Q6PA37 A0A974DHC0
LinkDB
Position
2S:complement(67963545..67989951)
AA seq 668 aa
MARINIAQDIINRQIKDKRALSFQRQHHVTDPFIRRLGLEAELQGHTGCVNCLEWNEKGN
FLASGSDDQHIMLWDPFHHKKLLSMHTGHTANIFSVKFLPHSGDRILITGAADAKIHVHD
ITSRETLHVFSEHTNRVKRIATAPLWPNTFWSAGEDGLIRQYDLRESGTHSEVLIDLTEY
CGQLVEAKCVSISPQDNNCLAVGASGPFVRLYDIRMIHSHRKNLQQTQSGIHTFCSQQKP
IPEGAAQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPDGTELLVNMGGEQVYLFDLTFKQ
RPCTFLLPKSLHTSGEVQNGKTTTNGIHHYSNGFRVADTWNLGAASDLPPHLEKVKQKAN
DAFAQQQWSQAIELYSEAVQRAPHSAMLYGNRAAAYMKRKWDGDHYDALRDCLQALALNP
AHLKAHFRLARCLFELHYVSEALECLEEFKVKFPDQARSSACDALDRDIRVALFSKNDTH
EDKKGGSVRLRSGGRKDSLSEDELLLRERSLDYKHRYCGHCNTTTDIKEASFMGSNGQYI
VSGSDDGSFFIWEKDTQALVRVLQGDDSIVNCLQPHPTYCFLATSGIDPVVRLWSPRPES
EGLDRRVVQDMEGACQANQRRMNADPLEVMLMNMGYRITGLSGGGSGNGGTGSDDEETDE
GQVQCRPS
NT seq 2007 nt   +upstreamnt  +downstreamnt
atggcccgcatcaatattgctcaggacatcattaacagacagataaaggataaaagagca
ttgagttttcagagacaacaccatgtaactgacccctttattcgacgcttgggcctggag
gcagaactacaaggccacactggatgtgtgaattgcttggaatggaatgagaagggaaat
tttctggcctctggctctgatgaccagcatataatgctttgggatcctttccatcacaag
aagcttctgtccatgcacacaggacatactgccaatatattctctgttaagtttcttcct
cattctggtgaccgcatccttattactggagcagcagatgcgaaaattcatgtccatgat
atcacatcccgtgaaacacttcatgttttctcggaacataccaatcgtgtgaaacgcatt
gccacagcacctctatggcctaacacattctggagtgcaggagaagatggccttataagg
cagtatgatttgagagagagtggtacccactctgaagtgctgattgatctaacagagtat
tgtggccagcttgtagaagctaagtgtgtaagcatcagtccacaggataacaactgtttg
gcagtaggggccagtgggccatttgtcaggctctatgatatacgtatgattcacagccac
agaaagaacctgcagcagactcagtctggcattcatacattttgctcccaacagaaacca
atcccagaaggagctgcacaatattatgttgcaggccatctacctgtcaaacttccagat
tataataaccggttgcgtgtgttggtggccacatatgtaacttttagccctgatgggact
gaactgcttgtcaacatggggggagagcaggtgtatctctttgatctaacatttaagcag
agaccttgtaccttcctactgcccaaatcgcttcacacatctggagaggtgcagaatgga
aaaacaacaaccaatggaattcaccattatagtaatggcttccgtgtggctgatacttgg
aatttgggagcagcctctgaccttcctccacaccttgagaaggtgaagcagaaagccaat
gatgcatttgctcagcagcagtggagtcaggctattgagctgtacagtgaggctgtccag
agagctccacacagtgccatgttgtatggaaatcgtgctgctgcttacatgaaacgcaag
tgggatggggaccactatgatgctttgcgagattgcttgcaggccttagcccttaaccca
gcccatctgaaggcacattttagattggcccgttgcctctttgaattacactatgtgtct
gaagctttggagtgtcttgaggagttcaaagtcaagttcccagaccaggcacggagcagt
gcatgtgatgcgctagacagagacatcagagtggctttattttccaaaaatgacacacat
gaagataaaaaagggggttcagtccgtctgcgttctggaggaagaaaggattctctgtca
gaggatgagctgctgctgagagagagaagtttggattataaacaccgatattgtggtcac
tgcaataccaccacggacattaaagaagccagcttcatgggaagcaatggccaatatatt
gtaagtgggtcggatgatggttccttcttcatctgggaaaaagacacacaagctcttgta
cgggttctccaaggagatgattctattgttaactgtcttcagccacatccaacgtattgc
ttcctggctacaagtggtattgacccagttgtccgactgtggagtccacgtcctgagagt
gagggcctagaccgacgggtggtacaggatatggagggagcctgtcaggccaaccagcgg
cgaatgaatgctgacccactggaggtgatgctgatgaacatgggttacaggatcacagga
ctcagtggtggggggtcagggaatggtggaacaggatctgatgatgaggagactgatgaa
ggacaggtgcaatgccgacccagctaa

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