Xenopus laevis (African clawed frog): 398949
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Entry
398949 CDS
T01010
Symbol
ythdf1.L, daca-1, ythdf1
Name
(RefSeq) YTH N(6)-methyladenosine RNA binding protein 1 L homeolog
KO
K20102
YTH domain-containing family protein
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
398949 (ythdf1.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
398949 (ythdf1.L)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Cbm74
Motif
Other DBs
NCBI-GeneID:
398949
NCBI-ProteinID:
NP_001083479
Xenbase:
XB-GENE-5943624
UniProt:
Q6PA59
A0A974H2G9
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All DBs
Position
9_10L:complement(17231008..17249603)
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AA seq
565 aa
AA seq
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MSATSVDPQRPKGQDSKVQNGSLHQKDSVHDNDFEQYLSGQSNQSNSYPSMTDPYLSSYY
PPSIGFPYSLSEAPWSTGGDPPIPYLTPYGQLSNGDHHFMHDAVFGQPGGLGNNIYQHRF
NFFPENPAFSAWGTSGSQGQQTQNSAYGGSYSYPPSSLGGTIVDGQTGFHNETLNKAPGM
NSIEQGMVGLKIGSNVTASAVKTVGSVVNSVGMPSALSGNGGTSISMPPSKPTSWAAIAS
KPAKPQPKAKTKPVTIIGGALPPPPIKHNMDIGTWDNKGPVAKPPGPQQIPSPQSMPQSQ
QQLLQPIPVQAPPLSQTQYQNPPPPQQQPQAPQNRWVAPRNRNAAYGQGGGPDGNPLGGA
QSHAAPGNESHPVLEKLKAAHSYNPKDFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCST
EHGNKRLDNAFRSMNGKGPVYLLFSVNGSGHFCGVAEMKSPVDYGTSAGVWSQDKWKGKF
DVKWLFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKLVLKIIATYKHTTSIFD
DFSHYEKRQEEEEVVRKVTPKPDSC
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctactagcgtggatccccagcgaccaaagggacaagacagtaaagttcaaaac
ggatccctgcatcagaaggacagcgtgcacgataatgactttgagcagtacctgtcgggg
cagtccaatcagagtaacagctacccttccatgacagacccttatctatccagttactac
cctccttctattggctttccgtattccctcagcgaagctccttggtcaactggtggggac
ccccccattccttacctcaccccgtacggacagctcagcaacggagatcaccatttcatg
catgatgcagtctttgggcagcctggaggcctagggaataacatttatcaacaccgcttc
aacttcttcccagaaaacccagccttttctgcttgggggacaagtggctcccagggccag
cagacccagaactctgcctatgggggcagttacagttatccaccaagttccttaggcggg
actatagttgatggacagactgggtttcacaatgaaactctgaataaagccccaggtatg
aacagcattgagcaaggcatggtgggcctaaagattggaagcaacgtcaccgcttctgct
gtaaagacagtgggatctgtggtaaacagtgttgggatgcccagtgcactgtctggtaat
ggcggcactagcataagcatgcctccctccaaaccaacttcatgggcagccatagccagt
aaacctgccaagccgcagcccaaagcaaaaactaaacctgtcaccataattggaggggcc
ctaccacctccccctattaagcataacatggacataggtacttgggacaataaagggcct
gtggctaagcccccggggcctcaacagatcccgtcccctcagtccatgccacaatctcag
caacagctgctgcagccaattccagttcaggctccgccgctgtctcagactcaataccaa
aatccaccgccccctcaacagcagccacaggcccctcagaatcgctgggtggccccaagg
aataggaacgctgcttatggtcagggtggaggcccagacgggaaccctctgggaggagcc
cagtctcacgctgcccccggaaatgagtctcaccctgtgctagagaaactgaaggccgcc
cacagctacaaccccaaggactttgactggaacctgaaaaatggacgtgtgtttataata
aagagctactctgaggatgatatccaccgttccatcaaatactccatctggtgcagcaca
gagcatgggaataaacgcttggataacgctttccgctccatgaatggcaaaggccccgtc
taccttctgttcagcgtcaacggcagtggacacttttgcggcgtagccgagatgaagtcc
cccgtggactatggcaccagtgccggtgtctggtcacaggacaaatggaagggcaagttt
gacgtcaagtggctctttgtcaaggacgttcccaataaccagctgaggcacatccgcctg
gagaataacgacaacaaaccggtcacaaactcccgagacacgcaggaggtgcccttagaa
aaagcaaaactggtgcttaaaatcattgccacttacaagcacacgacctccatctttgat
gacttttctcattacgagaagcggcaggaagaggaagaggttgtgcgcaaggtaacgcct
aaacccgactcatgctaa
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