Xenopus laevis (African clawed frog): 399082
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Entry
399082 CDS
T01010
Symbol
gata6.L, gata-6, gata6, gata6-a, gata6-b, gata6a, gata6b, tGata6, XGATA-6, XGATA6
Name
(RefSeq) GATA-binding factor 6-B
KO
K17897
GATA-binding protein 6
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
399082 (gata6.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
399082 (gata6.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GATA-N
GATA
DUF7573
Zn_Ribbon_TF
Zn_Ribbon_Prim
ArfGap
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
399082
NCBI-ProteinID:
NP_001083725
Xenbase:
XB-GENE-865113
UniProt:
P70005
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All DBs
Position
6L:115719118..115744533
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AA seq
502 aa
AA seq
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MDLSEDSWSGGTRLSPENSFFPCPIKQSPGTSPPPSPCSHVGSSECLRSEPDRSQQNIST
EGRPSASYHPLGLSHPEDLILFRDLDHINKLVVPNREPRYSSTLPEPPSGDMYQTLTITA
AQGPLGYDPSPGTFMHSAASSPVYVPTSRVGSMLTSISYLQGTGASQGTHSVNSHWSQAT
SESSSYSSSSPHPSSRYHYSPSPPMANGSTRDTGYSSSLAVSGRDQYAPLARPLNGSYGS
PYTPYMTPQLTSAWPAGPFDNTMLHSLQSRGAPISVRGAPGDVLDELPESRECVNCGSVQ
TPLWRRDGTGHYLCNACGLYSKMNGLSRPLIKPQKRVPSSRRIGLACANCHTTTTTLWRR
NTEGEPVCNACGLYMKLHGVPRPLAMKKEGIQTRKRKPKNLNKSKSSSSNGNSSHHITMT
PTSTTSSTNSDDCIKNGSPSQNTAPVVTSSLMSAQQTGSASPDSNILKYTGQDGLYSAVS
LSSASEVAASVRQDSWCALALA
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagtgaggacagctggtccggcggcacacggctgagtcctgagaattccttc
ttcccctgtccgatcaaacagagcccgggcacctctccgccaccttccccctgctcccac
gttggttcctccgagtgcctgcggagtgagccagacagaagtcagcagaacatttccaca
gaggggaggccatctgcctcctatcacccgcttggcctctcccacccggaggatctcatc
ttgtttagggacttggatcacattaacaagcttgttgtacccaaccgggagcctcgctac
agcagcaccctgcctgagccgccttctggggacatgtaccagacacttactataacggcg
gcgcaagggcctctcggctatgacccctctccgggcactttcatgcactccgctgccagc
tcaccagtctatgtgcccactagcagggtaggctccatgctcacaagcatctcctacttg
cagggcaccggggcatcccaaggcacccattcagtgaacagtcactggtcacaggcaact
tccgagagctcgtcatacagcagcagtagcccgcacccctccagccggtaccactactcc
cccagcccgcctatggccaatggatctacccgggatacaggctacagcagcagtctcgct
gtcagtggcagagaccagtacgccccactggccagaccacttaatggatcctatggaagc
ccttatacaccttacatgaccccccagctaacatctgcctggcctgctggaccctttgac
aacactatgcttcacagcctgcaaagcagaggagcaccaatcagtgtcagaggggcccct
ggagatgtgttggacgagctgccagaaagccgagagtgtgttaactgcggctcagtgcag
acccccctgtggagacgagatggcaccggtcactatctgtgcaacgcctgcggactgtac
agcaagatgaatggactgagccggccgctcatcaaacctcagaagcgagtgccttcatca
aggcgaattggactggcatgtgcaaactgtcacaccacaacaacgacattatggcgcaga
aatacagaaggagagccagtatgcaatgcctgtggcctgtacatgaaactccatggggtg
ccgcggccacttgctatgaagaaggaaggtattcaaaccagaaagagaaagccaaagaac
ctaaacaaatccaaatcttcatctagtaatggtaacagcagccaccacattaccatgact
ccaacttcaacaacatcctccacaaattctgatgactgcataaagaatggttcacccagt
caaaacacagcacctgtagtgacttcatcgctgatgtctgctcaacaaactgggagtgcc
agtccagacagcaacatactaaagtacacaggtcaagatgggctatactctgcagtcagt
ctgagctcagcctctgaagtcgcagcctctgtcagacaggattcatggtgtgctttggcc
ttggcttga
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