Xenopus laevis (African clawed frog): 399087
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Entry
399087 CDS
T01010
Symbol
xpo1.S, crm1, exportin-1, Xpo, xpo1
Name
(RefSeq) exportin 1 S homeolog
KO
K14290
exportin-1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03008
Ribosome biogenesis in eukaryotes
xla03013
Nucleocytoplasmic transport
xla03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
399087 (xpo1.S)
03008 Ribosome biogenesis in eukaryotes
399087 (xpo1.S)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
399087 (xpo1.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
399087 (xpo1.S)
03009 Ribosome biogenesis [BR:
xla03009
]
399087 (xpo1.S)
03016 Transfer RNA biogenesis [BR:
xla03016
]
399087 (xpo1.S)
03036 Chromosome and associated proteins [BR:
xla03036
]
399087 (xpo1.S)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
399087 (xpo1.S)
Ribosome biogenesis [BR:
xla03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
399087 (xpo1.S)
Pre-60S particles
399087 (xpo1.S)
Transfer RNA biogenesis [BR:
xla03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
399087 (xpo1.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
399087 (xpo1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
mTOR_dom
BspA_v
Hydrolase_3
ADH_zinc_N_2
Motif
Other DBs
NCBI-GeneID:
399087
NCBI-ProteinID:
NP_001083734
Xenbase:
XB-GENE-993244
UniProt:
A0A974CPW3
Q6NS03
LinkDB
All DBs
Position
5S:complement(1002405..1035279)
Genome browser
AA seq
1071 aa
AA seq
DB search
MPAIMTMLADHAARQLLDFSQKLDINLLDNVVNCLYHGEGAQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYGLQILENVIKTRWKILPRNQCDGIKKYVVGLIIKTSSDATCV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFD
FSTGQITQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAQLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVSLKCLTEIAGVSVSQYEEQFVTLFTLTMMQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSASPLLSGSQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQTVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQANGEMVTKQPLIRSMRTVKRETLKLISGWVSRSSDPQMVAENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLGVHITAEIPQIFDAVFECTLNMINKDFEE
YPEHRTHFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHTFSVVTDTSHTAGLTMHASILAYMFNLVEEGKINT
PLNQASPLNNQLFIQEYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIAAFKEHLRDFLV
QIKEYAGEDTSDLFLEERESSLRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaattatgaccatgttagcagaccatgcagctagacagctgctggatttcagc
cagaaactggacatcaacctactggacaatgtggtgaattgtttataccacggggaagga
gctcagcaaagaatggcacaggaggttttgacccacttaaaagaacacccagatgcatgg
acaagagttgatacaatcctagaattctcacagaacatgaacaccaaatattatggtctg
cagatcttggaaaatgtaataaaaacaagatggaaaattcttcctcggaatcagtgtgat
ggaatcaaaaagtacgttgtgggactaatcatcaagacttcctcagatgcaacatgtgta
gagaaagaaaaagtgtatattggaaagctgaacatgattctcgttcagatattaaaacag
gaatggcctaaacattggcccacatttatcagcgatattgtgggagcaagcagaaccagc
gagagcctctgtcaaaacaacatggttattctgaagctgttgagtgaggaagtttttgat
ttttccactggtcagattacacaagtaaaagccaaacacctgaaagacagtatgtgcaat
gagttctcccagatatttcagctgtgtcagtttgtgatggaaaattcacaaaatgctcaa
ctagttcatgctactctggaaacactgcttcgatttcttaactggattcctctaggatat
atctttgaaaccaagctcatcagcacacttgtatataagtttttaaatgttcccatgttc
cgaaatgtctctttgaagtgcctcactgagatagctggagttagtgtgagccagtatgag
gagcagtttgtaactctttttacactgaccatgatgcagctgaaacagatgctgcctttg
aatacaaatatccgtcttgcttattcaaatgggaaagacgatgagcagaatttcattcag
aacctcagcttgtttctttgtacctttcttaaagagcatgggcagcttatagaaaaaaga
ctcaacctgagagagactctaatggaggctctgcactacatgttgcttgtttctgaagtg
gaagagacagaaatcttcaaaatctgccttgaatactggaaccatctagcagcagagctc
tacagggagagtccattttcaacatccgcgtccccactactttctggtagccagcatttt
gatgttcctcctagaaggcaattgtatttgcctgttttatcaaaggtgcgattgttgatg
gtgagtcgtatggctaagccggaggaagttctagtagtggaaaatgatcagggtgaagtg
gtccgtgaatttatgaaggacacagattctatcaacttgtacaagaacatgagggaaact
ttggtatacctcactcacctggattacgcagatacagagcgaattatgactgaaaaactc
cataaccaagttaatggcactgagtggtcctggaaaaacctaaatacattgtgttgggca
attggatcaataagtggagctatgcatgaggaagatgaaaagagatttcttgttaccgtc
ataaaagatctccttggtctgtgtgagcagaagcgtggcaaggataataaagccatcatt
gcatcaaacataatgtacattgtgggccaataccccagatttctgagagctcattggaaa
tttttaaagactgttgtaaacaagttatttgaatttatgcatgaaacccacgacggtgtt
caagatatggcatgtgatactttcattaagattgcacagaagtgccgtagacattttgtt
caagtgcaggttggagaagtaatgcctttcattgatgagatcttgaacaatatcaatacc
attatatgtgatcttcaaccacaacaggttcacacattctatgaagcagttgggtacatg
attggggctcagacggaccaaactgtacaagagcatttaatagaaaagtatatgttacta
ccaaatcaagtgtgggacagtatcattcagcaagccacaaagaatgttgatatattgaaa
gacccagaaactgtaaaacagcttggcagcattttgaaaacaaatgtaagagcgtgtaaa
gcggttggtcatccttttgttatccagttgggaagaatttacctggatatgttaaacgtg
tacaagtgcctaagtgaaaacatttctgcggctatacaggcaaatggtgagatggtcact
aaacaaccactcatcagaagtatgaggactgtcaaaagggaaactctaaaattgatttct
ggctgggtgagcaggtccagtgacccacagatggttgctgaaaactttgttcctccctta
ttggacgccgttcttattgattaccagagaaatgtaccggctgcccgagagcctgaagta
ctcagcacaatggctacgattgtaaacaagctgggggtgcatattacagccgaaatacct
caaatatttgatgctgtatttgaatgcacgttgaatatgattaacaaggactttgaagag
tatccagagcacaggacacactttttcttgcttcttcaagctgtgaattcccactgcttt
cctgcatttttggctatccctccagctcagtttaaactagtgttggattctattatttgg
gccttcaaacacacaatgagaaatgttgcagatacaggtctacagattctatacaccttg
ttgcagaatgtcgcccaagaggaagctgcagcgcagagtttctaccaaacgtatttctgt
gacattcttcagcacacattctctgttgtaacagacacatcacatactgctggcttaaca
atgcatgcatccattttggcatacatgttcaatctagtggaagaaggaaagataaatacg
cctttgaatcaagctagtcctcttaacaaccagctgtttattcaagaatatgtggctaac
cttctaaagtctgcgtttccccacttacaagatgcgcaggttaaactttttgtgactggc
ctcttcagtttaaaccaggacattgcagcatttaaggaacatcttagggacttccttgta
cagattaaggaatatgccggtgaagacacatccgacctgtttctggaggaaagagaatct
tcccttcgacaagctcaagaggagaaacacaaacttcagatgtctgttcctggaatactt
aatccacacgaaattcctgaagaaatgtgcgactag
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integrated database retrieval system