KEGG   Xenopus laevis (African clawed frog): 399087
Entry
399087            CDS       T01010                                 
Symbol
xpo1.S, crm1, exportin-1, Xpo, xpo1
Name
(RefSeq) exportin 1 S homeolog
  KO
K14290  exportin-1
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03008  Ribosome biogenesis in eukaryotes
xla03013  Nucleocytoplasmic transport
xla03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    399087 (xpo1.S)
   03008 Ribosome biogenesis in eukaryotes
    399087 (xpo1.S)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    399087 (xpo1.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    399087 (xpo1.S)
   03009 Ribosome biogenesis [BR:xla03009]
    399087 (xpo1.S)
   03016 Transfer RNA biogenesis [BR:xla03016]
    399087 (xpo1.S)
   03036 Chromosome and associated proteins [BR:xla03036]
    399087 (xpo1.S)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     399087 (xpo1.S)
Ribosome biogenesis [BR:xla03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    399087 (xpo1.S)
  Pre-60S particles
    399087 (xpo1.S)
Transfer RNA biogenesis [BR:xla03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    399087 (xpo1.S)
Chromosome and associated proteins [BR:xla03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     399087 (xpo1.S)
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N TPR_TNPO3_IPO13_2nd mTOR_dom BspA_v Hydrolase_3 ADH_zinc_N_2
Other DBs
NCBI-GeneID: 399087
NCBI-ProteinID: NP_001083734
Xenbase: XB-GENE-993244
UniProt: A0A974CPW3 Q6NS03
LinkDB
Position
5S:complement(1002405..1035279)
AA seq 1071 aa
MPAIMTMLADHAARQLLDFSQKLDINLLDNVVNCLYHGEGAQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYGLQILENVIKTRWKILPRNQCDGIKKYVVGLIIKTSSDATCV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFD
FSTGQITQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAQLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVSLKCLTEIAGVSVSQYEEQFVTLFTLTMMQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSASPLLSGSQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQTVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQANGEMVTKQPLIRSMRTVKRETLKLISGWVSRSSDPQMVAENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLGVHITAEIPQIFDAVFECTLNMINKDFEE
YPEHRTHFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHTFSVVTDTSHTAGLTMHASILAYMFNLVEEGKINT
PLNQASPLNNQLFIQEYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIAAFKEHLRDFLV
QIKEYAGEDTSDLFLEERESSLRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq 3216 nt   +upstreamnt  +downstreamnt
atgccagcaattatgaccatgttagcagaccatgcagctagacagctgctggatttcagc
cagaaactggacatcaacctactggacaatgtggtgaattgtttataccacggggaagga
gctcagcaaagaatggcacaggaggttttgacccacttaaaagaacacccagatgcatgg
acaagagttgatacaatcctagaattctcacagaacatgaacaccaaatattatggtctg
cagatcttggaaaatgtaataaaaacaagatggaaaattcttcctcggaatcagtgtgat
ggaatcaaaaagtacgttgtgggactaatcatcaagacttcctcagatgcaacatgtgta
gagaaagaaaaagtgtatattggaaagctgaacatgattctcgttcagatattaaaacag
gaatggcctaaacattggcccacatttatcagcgatattgtgggagcaagcagaaccagc
gagagcctctgtcaaaacaacatggttattctgaagctgttgagtgaggaagtttttgat
ttttccactggtcagattacacaagtaaaagccaaacacctgaaagacagtatgtgcaat
gagttctcccagatatttcagctgtgtcagtttgtgatggaaaattcacaaaatgctcaa
ctagttcatgctactctggaaacactgcttcgatttcttaactggattcctctaggatat
atctttgaaaccaagctcatcagcacacttgtatataagtttttaaatgttcccatgttc
cgaaatgtctctttgaagtgcctcactgagatagctggagttagtgtgagccagtatgag
gagcagtttgtaactctttttacactgaccatgatgcagctgaaacagatgctgcctttg
aatacaaatatccgtcttgcttattcaaatgggaaagacgatgagcagaatttcattcag
aacctcagcttgtttctttgtacctttcttaaagagcatgggcagcttatagaaaaaaga
ctcaacctgagagagactctaatggaggctctgcactacatgttgcttgtttctgaagtg
gaagagacagaaatcttcaaaatctgccttgaatactggaaccatctagcagcagagctc
tacagggagagtccattttcaacatccgcgtccccactactttctggtagccagcatttt
gatgttcctcctagaaggcaattgtatttgcctgttttatcaaaggtgcgattgttgatg
gtgagtcgtatggctaagccggaggaagttctagtagtggaaaatgatcagggtgaagtg
gtccgtgaatttatgaaggacacagattctatcaacttgtacaagaacatgagggaaact
ttggtatacctcactcacctggattacgcagatacagagcgaattatgactgaaaaactc
cataaccaagttaatggcactgagtggtcctggaaaaacctaaatacattgtgttgggca
attggatcaataagtggagctatgcatgaggaagatgaaaagagatttcttgttaccgtc
ataaaagatctccttggtctgtgtgagcagaagcgtggcaaggataataaagccatcatt
gcatcaaacataatgtacattgtgggccaataccccagatttctgagagctcattggaaa
tttttaaagactgttgtaaacaagttatttgaatttatgcatgaaacccacgacggtgtt
caagatatggcatgtgatactttcattaagattgcacagaagtgccgtagacattttgtt
caagtgcaggttggagaagtaatgcctttcattgatgagatcttgaacaatatcaatacc
attatatgtgatcttcaaccacaacaggttcacacattctatgaagcagttgggtacatg
attggggctcagacggaccaaactgtacaagagcatttaatagaaaagtatatgttacta
ccaaatcaagtgtgggacagtatcattcagcaagccacaaagaatgttgatatattgaaa
gacccagaaactgtaaaacagcttggcagcattttgaaaacaaatgtaagagcgtgtaaa
gcggttggtcatccttttgttatccagttgggaagaatttacctggatatgttaaacgtg
tacaagtgcctaagtgaaaacatttctgcggctatacaggcaaatggtgagatggtcact
aaacaaccactcatcagaagtatgaggactgtcaaaagggaaactctaaaattgatttct
ggctgggtgagcaggtccagtgacccacagatggttgctgaaaactttgttcctccctta
ttggacgccgttcttattgattaccagagaaatgtaccggctgcccgagagcctgaagta
ctcagcacaatggctacgattgtaaacaagctgggggtgcatattacagccgaaatacct
caaatatttgatgctgtatttgaatgcacgttgaatatgattaacaaggactttgaagag
tatccagagcacaggacacactttttcttgcttcttcaagctgtgaattcccactgcttt
cctgcatttttggctatccctccagctcagtttaaactagtgttggattctattatttgg
gccttcaaacacacaatgagaaatgttgcagatacaggtctacagattctatacaccttg
ttgcagaatgtcgcccaagaggaagctgcagcgcagagtttctaccaaacgtatttctgt
gacattcttcagcacacattctctgttgtaacagacacatcacatactgctggcttaaca
atgcatgcatccattttggcatacatgttcaatctagtggaagaaggaaagataaatacg
cctttgaatcaagctagtcctcttaacaaccagctgtttattcaagaatatgtggctaac
cttctaaagtctgcgtttccccacttacaagatgcgcaggttaaactttttgtgactggc
ctcttcagtttaaaccaggacattgcagcatttaaggaacatcttagggacttccttgta
cagattaaggaatatgccggtgaagacacatccgacctgtttctggaggaaagagaatct
tcccttcgacaagctcaagaggagaaacacaaacttcagatgtctgttcctggaatactt
aatccacacgaaattcctgaagaaatgtgcgactag

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