Xenopus laevis (African clawed frog): 399092
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Entry
399092 CDS
T01010
Symbol
smc3.L, Cspg6, smc3, xsmc3
Name
(RefSeq) structural maintenance of chromosomes 3 L homeolog
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04110
Cell cycle
xla04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
399092 (smc3.L)
04114 Oocyte meiosis
399092 (smc3.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
399092 (smc3.L)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xla00535
]
399092 (smc3.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
399092 (smc3.L)
Meiosis-specific proteins
Cohesin complex and associated proteins
399092 (smc3.L)
Proteoglycans [BR:
xla00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
399092 (smc3.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
399092
NCBI-ProteinID:
NP_001083742
Xenbase:
XB-GENE-957588
UniProt:
Q8AW91
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All DBs
Position
7L:complement(1725369..1746598)
Genome browser
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSSKRETSGEKSRQLRDAQQDARDKMEEIERQVRELKSKISAMKEEKEQLSSERQEQIK
QRTKLELKTKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFSSVKQKEES
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAINKDL
EETEANKEKNLEQYTKLDQDLNEVKTRVEELDKKYYEVKNKKDELQSERNYLWREENAEQ
QSLAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVINGYHGIVMNNF
DCEPAFYTCVEVTAGNRLFYHIVESDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNLRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKVEDELHALEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGTITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTLARSEGLDITIDKTEVESKDLVKS
MDRWKNMEKDHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGHKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERG
SGTQSSVPSVDQFTGVGIRVSFTGKQAEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELASHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEQAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcaagcaggtgatcattcagggcttccggagctacagagatcaaacgatcgtc
gatccatttagttccaagcacaatgttattgtgggaagaaatggatcggggaaaagtaat
tttttctacgccattcagtttgtactcagtgatgaattcagccatctccgtccagagcaa
aggctggcgttactacatgaaggaactgggccccgtgttatttctgcttttgtagaaatt
atatttgataactccgacaacagattaccaattgacaaagaagaggtttcccttcggaga
gtgattggtgccaaaaaagatcagtatttcctggacaagaaaatggtgacaaaaaatgat
gtaatgaatcttcttgaaagcgcagggttttctcgtagcaatccttactacattgtgaaa
caaggcaagatcaaccagatggccacagcacccgactctcaaaggcttaagctgctgagg
gaggtagctgggacgagggtgtatgatgaacgtaaagaagaaagtatctccttaatgaaa
gaaactgagggtaagcgagagaaaattaatgagctgctgaagtacattgaggaaagactg
cacaccttggaggaggaaaaggaagagctggctcagtatcagaaatgggacaagatgcgt
agggccttggaatataccatttacaatcaggagctgaatgagactcgtgcaaagcttgac
gagctttcttcaaagcgtgagacgagtggagagaaatctcggcagttaagggatgctcag
caggatgccagggacaaaatggaggaaatagaacggcaagttcgtgaattgaaatcaaag
atctctgcaatgaaagaggaaaaggaacagctcagttctgagagacaggagcaaattaaa
caaaggaccaagttagagcttaaaactaaggatttgcaggatgaacttgctgggaacagt
gagcaacggaaacggctgttaaaagagaggcagaagttactggagaaaatcgaggaaaaa
caaaaagagcttgctgagactgaaccaaagttcagcagtgtgaaacaaaaagaggaaagt
gggattgcaaggctggcccaggcaactcaggaaagaacagatctctatgccaagcaaggc
cgtggcagccagtttacatcaaaagaagagagagataagtggattaagaaagagctgaag
tccttagaccaggccatcaatgataaaaagcgtcagattgcagccattaacaaggatttg
gaagaaacagaagcaaataaggagaagaatctggaacagtatacaaaattggatcaagat
ttgaatgaggtaaagactcgcgttgaagaactggataaaaaatactatgaagtgaaaaac
aaaaaagacgagcttcagagtgagagaaattacttatggagggaggagaatgctgaacag
caatccctcgctgccaaaagggaagatcttgagaagaaacaacagctcctcagggctgct
actggaaaggcaattttaaatggcattgacagcatcaataaagtgttggaacacttcagg
cgtaaaggcataaatcagcatgttatcaacggctatcatggcatagtgatgaataacttt
gactgtgagccagctttctacacctgtgttgaggtcactgctggaaacaggttgttctat
catattgttgaatcggatgaggtcagcaccaagatattaatggagtttaataaaatgaac
ctgcctggagaagtaacatttctacctctcaacaaactggatgttagagacactgcctac
ccagagactaatgatgccatcccaatgataagcaagcttcgatataatcttcgatttgat
aaagctttcaagcacgtttttggaaagactcttatatgccgcagtatggaagtatctacg
cagctggccagggcatttactatggattgcatcaccttggaaggtgatcaggtgagccat
cggggggccctaacaggggggtactatgatacaagaaagtcccgccttgaactacagaaa
gacgtgcgcaaagtggaggatgagctccatgctctggaggcaaagctgaatgagaacctg
cgcagaaacattgagagaattaacaatgaaatcgatcagctaatgaatcagatgcagcaa
attgagacccagcagaggaaatttaaagcttctcgggacagtatattatcagagatgaaa
atgctcaaagaaaagaggcagcagtctgagaaaaccttcatgcctaagcaaagaagtctg
caaagtttggaggcgagtttacatgccatggagtcaactagggagtctctgaaagccgaa
ctgggcacagacctgctgtcacagctcagtcttgaagaccaaaaaagggtggatgccctc
aacgatgagattcgacagttgcagcaagaaaacaggcaactcctgaatgagagaattaag
ctggagggaacaatcactagagtagagacctaccttaatgagaatctcaggaagaggctg
gaccaagtggaacaggagctaaatgaactacgggagacggaggggggcactgtgctcact
gctactacgtctgagttggaagccatcaacaaacgtgtaaaggacactcttgcacgatca
gaaggtctggatattacaattgacaaaacagaagtagagagcaaagatcttgtgaaaagc
atggaccggtggaagaacatggagaaagatcacatggacgccattaaccacgacaccaaa
gaattggagaagatgaccaaccggcagggaatgctcctgaagaagaaggaggagtgtatg
aagaagatccgggagctcggctctctcccacaggaggccttcgaaaagtaccagacccta
agtttaaaacagttgttcaggaagctggagcagtgcaacacggagctgaagaaatacagc
cacgtcaataaaaaggctttggaccaatttgtcaacttctcagaacaaaaggagaaactg
atcaaacgacaggaagaactggaccggggccataaatccatcatggagctcatgaacgtt
ctagagctcaggaagtacgaggccatccagctcacgttcaaacaggtgtccaagaatttc
agtgaagttttccagaagttggtgccgggagggaaggccacgctggtgatgaagaaggga
gacgtggaggggagtcagtcgcaggacgagggggaaggaagcggggagagtgagaggggg
tccgggacccagagcagtgtcccttctgtcgatcagttcacaggagttggaattcgggtc
tcattcacagggaaacaagcggagatgagggaaatgcagcagctctctggggggcagaag
tctttggtagctttagcacttatatttgccatccagaaatgtgaccccgcccccttctac
ttgtttgatgaaatcgaccaggcgctggatgctcagcacaggaaggccgtgtcagatatg
atcatggagttggcttcccacgcgcagttcatcaccacaactttccggcctgagctgttg
gagtcggccgacaagttttatggagtcaaattcagaaacaaggtcagtcacattgatgtg
atcacagcggagcaggccaaggactttgtggaagacgacacgactcacggctga
DBGET
integrated database retrieval system
