Xenopus laevis (African clawed frog): 399157
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Entry
399157 CDS
T01010
Symbol
clock.L, clk, clock, Xclk, XClock
Name
(RefSeq) clock circadian regulator L homeolog
KO
K02223
circadian locomoter output cycles kaput protein [EC:
2.3.1.48
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
399157 (clock.L)
03036 Chromosome and associated proteins [BR:
xla03036
]
399157 (clock.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
399157 (clock.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
399157 (clock.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
399157 (clock.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
bHLH_NCOA
bHLH_NPAS4
Hormone_1
Motif
Other DBs
NCBI-GeneID:
399157
NCBI-ProteinID:
NP_001083854
Xenbase:
XB-GENE-6254406
UniProt:
Q9I9Q6
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All DBs
Position
1L:complement(42166933..42222907)
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AA seq
825 aa
AA seq
DB search
MSSTADRDDGSIFDGLVEEDDKDKAKRVSRNKSEKRRRDQFNILIKELGSMLPGNARRID
KSTVLQKSIDFLQKHKEISAQSDASEIRQDWKPTFLSNEEFTQLMLEALDGFFLAVMTDG
NIIYVSESVTSLLEHLPSDLVDQSIFNFVPEGEHSEVYKILSTRMLESGSLSSEYLKTKN
ELEFCCHMLRGTADPKEPSTYEFVKFIGNFKSLNNVPNSTHNGFDGALQRSLRPPYEERV
CFVATVRLATPQFIKEMCTVEESNEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSG
YDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTRYYITYHQWNSRPEFI
VCTHTVVSYAEVGAERRRERGNEDSPPAITAEKNQDSVSDNHMNTVSLKEALERFDDSRT
PSPSSKSSIKSSSHTAVSDPSSTPTKIPTDTSTPPRQALTGLDKRRSSISSQSMSSQSVS
QPLSQSVMKQTASIQLQQGMTQPMFQFTAQFGAMKHLKDQLEQRTRIIEENIQRQQEELR
KIQDQLQMVHGQGIQMYLQQPAPGLNFGPVQYSSGNSPSIQQLPQFTMQGQVVQTNQLQG
VMNTGHVGAQHIMQQQQLHNTSQQGQQNIHGGHNQQTSLSSQTSGTLTSPLYNTMVISQP
PSGSMVQMPSNIQQSNQGASVTTFPQDRQIRFSQAQQIVTKLVTTPMACGTVMVPSTMFM
GPVVTAYPTFTTQQQQPQTLSFTQHQQNQQDQQTVPTIQQPAHAQLAQQPQQFLQTSRLV
HGNQSTQLILSPFPVQQNTFAPSHQQQLSHHRTDTMSDPSKVQQQ
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgagctccactgcagacagagatgacggtagtatatttgatggactggtagaagaagat
gacaaggataaagcaaagagggtgtctcggaacaaatcggagaaacggagaagagatcag
ttcaatattctcattaaggagcttgggtctatgttgccaggcaatgccagaagaatagac
aaatccacagtgctgcagaaaagcattgacttcctacagaagcataaagaaatcagtgca
cagtcggatgctagcgaaatacgacaagactggaaacctactttccttagtaatgaagaa
tttactcaactcatgctggaggcgctggatggatttttcctggcagttatgacagatgga
aacataatatatgtatctgaaagcgtgacctccttacttgaacacttaccatctgatctt
gttgatcagagtatatttaattttgtccccgagggggaacattcagaagtgtataaaatt
ctgtctacgcggatgttggaaagtggttctttgtcatcggagtatcttaaaacaaaaaat
gaactagaattctgttgccacatgctaagaggcacagccgatcctaaagagccatcaacg
tacgaatttgtaaagtttattggaaacttcaagtctttaaataatgtgcccaactctaca
cataatggatttgatggtgcattacagaggtctctgcggccaccctatgaagagagagtg
tgctttgtagccactgtaaggctagctactccacagttcattaaggaaatgtgcactgta
gaggaatccaatgaagagttcacatcaaggcacagtctggaatggaagtttcttttcttg
gaccacagggcccctccaatcattggatatttgccttttgaggtgctaggaacttctggc
tatgattattatcacgtggatgacctggaaaaccttgcaaaatgccatgaacacttaatg
cagtatggaaaaggcaagtcatgctattacaggttcctgacaaaaggacagcaatggata
tggctgcagacgcgctactatatcacctaccatcagtggaattccaggccagagtttata
gtttgtacgcatactgtagtaagctatgcagaggttggagcagaaagaagacgtgagcgg
ggcaatgaagattcccctcctgccataactgcagaaaaaaatcaggactctgtctcagac
aatcacatgaacacagtcagtctgaaggaagctttggaaagatttgatgacagccgaacg
ccttcaccgtcatccaaaagctcaattaaatcatcctctcacacagcagtttccgaccca
tcatcaacgccaacaaagatcccaacagacacaagcacaccacctagacaagctttaact
ggccttgacaagaggaggtcatcaatcagcagccagtctatgagctctcagtcagtcagt
cagcctctgtcgcagtcagtgatgaagcaaacagcatctattcagctccagcaaggaatg
acacagcccatgtttcagttcacggcgcagtttggagctatgaagcacctgaaggaccag
ctggagcagagaactcggatcattgaagaaaacatccagcggcagcaggaggagctgcgt
aagattcaggaccagttgcaaatggtccatgggcagggaatccagatgtatttacagcaa
ccagcaccagggctaaattttgggccagtacagtactcttctggaaatagcccaagcatt
cagcagttaccgcagttcaccatgcaaggccaagtggtccagactaaccaacttcaaggt
gtcatgaacactgggcatgtgggagctcagcacataatgcagcagcaacagttacacaat
acaagccagcaaggccagcagaacattcatggaggacacaaccagcagacttcactgtct
agccagacatcgggaactctcactagtcctttgtacaacacaatggtgatctcccagcca
ccttcaggtagtatggtacagatgccttccaacatacagcagagcaaccagggagcctct
gttactacatttcctcaggacaggcagattaggttttctcaagctcagcaaattgtcact
aagctggtgaccactcctatggcttgtggaacagttatggtcccaagcacaatgtttatg
ggcccagtggttactgcctaccctacatttactacacagcagcagcaacctcaaacctta
tcattcacccagcatcaacaaaatcagcaagaccaacagacagtgcctacaatacagcag
cctgctcacgcacaactagcccagcagccacaacagtttttgcagacctcgaggttggtt
catggaaaccagtccacacagctgattctttcccctttccctgtgcaacagaacactttt
gccccatcccaccagcagcagttatcccatcacaggactgacactatgagtgatccttcc
aaggtgcagcaacagtag
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