Entry
Symbol
rbm8a.S, rbm8, rbm8-A, rbm8a, rbm8a-A, rbm8a-b, rbm8b, tsunagi, Y14, znrp, zrnp1
Name
(RefSeq) RNA-binding protein 8A-A
KO
Organism
xla Xenopus laevis (African clawed frog)
Pathway
Brite
KEGG Orthology (KO) [BR:xla00001 ]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
399167 (rbm8a.S)
09122 Translation
03013 Nucleocytoplasmic transport
399167 (rbm8a.S)
03015 mRNA surveillance pathway
399167 (rbm8a.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:xla03019 ]
399167 (rbm8a.S)
03041 Spliceosome [BR:xla03041 ]
399167 (rbm8a.S)
Messenger RNA biogenesis [BR:xla03019 ]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
399167 (rbm8a.S)
Spliceosome [BR:xla03041 ]
Complex C
Other components
EJC/TREX
399167 (rbm8a.S)
BRITE hierarchy
SSDB
Ortholog Paralog Gene cluster GFIT
Motif
Motif
Other DBs
LinkDB
All DBs
Position
8S:complement(101712984..101716757)
Genome browser
AA seq
174 aa AA seq DB search
MADVLDLHEAGGEDFAMDEDGDDSIHKLKEKAKKRKGRGFGADEGTKTRIREVYDSVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFGEFGEIKNIHLNLDRRTGFLKGYALVE
YETYKEALAAMEGLNGQDLMGQPVSVDWGFVRGPPKGKRRSGRRRSRSPERRRR
NT seq
525 nt NT seq +upstream nt +downstream nt
atggcggatgtactggatcttcacgaggctggcggggaggacttcgctatggatgaagat
ggggacgacagtatccacaaactgaaggaaaaggccaagaaaaggaagggcagaggattc
ggtgcagatgaaggcaccaaaacgaggatccgggaagtctatgacagtgtggagcaggat
ggagacgagccgggaccccagagatctgtggaaggctggatcctgtttgtcaccggggtg
catgaagaggccacagaggaggatatacacgataagtttggcgaattcggtgagatcaag
aacatccacctgaatctggaccggaggacgggtttcctgaagggctacgcactggtggaa
tatgagacgtacaaagaagctctggcggccatggaagggttaaacggacaagacctcatg
gggcagccagtcagtgtagactggggattcgtgagaggccccccgaaaggaaagaggaga
agtgggaggaggaggagccgaagcccagaaagaagacgacgttag