KEGG   Xenopus laevis (African clawed frog): 399210
Entry
399210            CDS       T01010                                 
Symbol
rae1.S, gle2, mig14, mnrp41, mrnp41, Rae1, rae1/gle2
Name
(RefSeq) Rae1/Gle2 protein
  KO
K14298  mRNA export factor
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    399210 (rae1.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    399210 (rae1.S)
   03036 Chromosome and associated proteins [BR:xla03036]
    399210 (rae1.S)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     399210 (rae1.S)
Chromosome and associated proteins [BR:xla03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    399210 (rae1.S)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WDR55 WD40 Beta-prop_EML_2 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd WD40_RFWD3 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_EIPR1 eIF2A Beta-prop_Nup120_160 NBCH_WD40 ExoI_SH3 Beta-prop_WDR41 Beta-prop_HPS5 WD40_MABP1-WDR62_2nd B-prop_COPA_B_2nd Beta-prop_SPT8
Other DBs
NCBI-GeneID: 399210
NCBI-ProteinID: NP_001083956
Xenbase: XB-GENE-17337885
UniProt: Q7ZZY7 A0A974H0D9
LinkDB
Position
9_10S:12626484..12643498
AA seq 368 aa
MTLFSTPGGFGTGGGSMFGSTATDNHNPMKDIEVASPPDDSISCLSFSPQTLPGNFLIAG
SWANDVRCWEVQDNGQTIPKAQQMHTGPVQDVCWSDDGTKVFTASCDKTAKMWDLNSNQS
IQIAQHDAPIKTVHWVKAPNYSCIMTGSWDKTLKFWDTRSPNPLLSIQLPERGYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVGIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTAAPQDIYAVNDIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNHNGNIFAYSSSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgactttgttttccactcctgggggatttggaaccgggggcggcagtatgttcggcagc
acagcgactgataaccacaatcctatgaaggacattgaagtcgcttcacctccggatgac
agcatctcgtgcctctctttcagtccccagacgctgcctggcaatttcctaatcgcagga
tcctgggccaatgatgtgaggtgctgggaggttcaggataatggccagaccattccaaag
gcgcaacagatgcacacaggtcctgtgcaggacgtctgctggagtgatgacgggaccaaa
gtgttcacagcctcgtgtgataagactgccaaaatgtgggatctaaacagcaaccagtca
atacaaatagcacagcatgatgcccctataaagactgtgcattgggtaaaggccccgaac
tacagttgcatcatgactggtagctgggataaaactttaaagttctgggacacacgatca
ccaaacccattgttgagcatacaactcccagaacgaggttactgcgcagatgtggtgtac
cctatggctgttgtggcaactgcagagagagggttaatagtgtatcagcttgagaaccag
ccctccgaattcagaagaatagactctccccttaaacatcagcaccgatgtgtcggcatt
tttaaagacaagcaaaacaagcccactggcttcgcacttggaagtatcgaaggaagagtc
gcgattcattacatcaaccctcccaatccagccaaagacaacttcacatttaaatgccac
cgctccaatggtacgaacacagcagcccctcaagatatctacgctgtaaatgacatcgct
tttcatcctgtacacggcactttggctacagttggatcagatgggcgattcagtttctgg
gacaaagatgcacggaccaaactgaagacttcggagcagctggaccagccaatcactgct
tgttgcttcaaccacaatggaaatatttttgcctattcgtctagctatgactggtccaag
ggacatgaattctacaatccacagaagaagaactatatcttcttgcgtaatgcagctgaa
gaattaaaaccaaggaacaagaaataa

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