Xenopus laevis (African clawed frog): 399210
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Entry
399210 CDS
T01010
Symbol
rae1.S, gle2, mig14, mnrp41, mrnp41, Rae1, rae1/gle2
Name
(RefSeq) Rae1/Gle2 protein
KO
K14298
mRNA export factor
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
399210 (rae1.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
399210 (rae1.S)
03036 Chromosome and associated proteins [BR:
xla03036
]
399210 (rae1.S)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
399210 (rae1.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
399210 (rae1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_EIPR1
eIF2A
Beta-prop_Nup120_160
NBCH_WD40
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Exonuc_X-T_C
B-prop_COPA_B_2nd
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
399210
NCBI-ProteinID:
NP_001083956
Xenbase:
XB-GENE-17337885
UniProt:
Q7ZZY7
A0A974H0D9
LinkDB
All DBs
Position
9_10S:12626484..12643498
Genome browser
AA seq
368 aa
AA seq
DB search
MTLFSTPGGFGTGGGSMFGSTATDNHNPMKDIEVASPPDDSISCLSFSPQTLPGNFLIAG
SWANDVRCWEVQDNGQTIPKAQQMHTGPVQDVCWSDDGTKVFTASCDKTAKMWDLNSNQS
IQIAQHDAPIKTVHWVKAPNYSCIMTGSWDKTLKFWDTRSPNPLLSIQLPERGYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVGIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTAAPQDIYAVNDIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNHNGNIFAYSSSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgactttgttttccactcctgggggatttggaaccgggggcggcagtatgttcggcagc
acagcgactgataaccacaatcctatgaaggacattgaagtcgcttcacctccggatgac
agcatctcgtgcctctctttcagtccccagacgctgcctggcaatttcctaatcgcagga
tcctgggccaatgatgtgaggtgctgggaggttcaggataatggccagaccattccaaag
gcgcaacagatgcacacaggtcctgtgcaggacgtctgctggagtgatgacgggaccaaa
gtgttcacagcctcgtgtgataagactgccaaaatgtgggatctaaacagcaaccagtca
atacaaatagcacagcatgatgcccctataaagactgtgcattgggtaaaggccccgaac
tacagttgcatcatgactggtagctgggataaaactttaaagttctgggacacacgatca
ccaaacccattgttgagcatacaactcccagaacgaggttactgcgcagatgtggtgtac
cctatggctgttgtggcaactgcagagagagggttaatagtgtatcagcttgagaaccag
ccctccgaattcagaagaatagactctccccttaaacatcagcaccgatgtgtcggcatt
tttaaagacaagcaaaacaagcccactggcttcgcacttggaagtatcgaaggaagagtc
gcgattcattacatcaaccctcccaatccagccaaagacaacttcacatttaaatgccac
cgctccaatggtacgaacacagcagcccctcaagatatctacgctgtaaatgacatcgct
tttcatcctgtacacggcactttggctacagttggatcagatgggcgattcagtttctgg
gacaaagatgcacggaccaaactgaagacttcggagcagctggaccagccaatcactgct
tgttgcttcaaccacaatggaaatatttttgcctattcgtctagctatgactggtccaag
ggacatgaattctacaatccacagaagaagaactatatcttcttgcgtaatgcagctgaa
gaattaaaaccaaggaacaagaaataa
DBGET
integrated database retrieval system
