Xenopus laevis (African clawed frog): 399226
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Entry
399226 CDS
T01010
Symbol
srsf1.L
Name
(RefSeq) serine/arginine-rich splicing factor 1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03040
Spliceosome
xla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
399226 (srsf1.L)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
399226 (srsf1.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
399226 (srsf1.L)
Spliceosome [BR:
xla03041
]
Common components
Common spliceosomal components
SR proteins
399226 (srsf1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
399226
NCBI-ProteinID:
XP_018100973
Xenbase:
XB-GENE-486879
UniProt:
A0A8J0UCS9
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Position
2L:complement(63230445..63235840)
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AA seq
317 aa
AA seq
DB search
MISSFTTLFDRNGEGGSNSRHLVSAPNLSSRVCLASIALFLYKPSAFKAIKLDTSAGGVI
RGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDA
EDAVYGRDGYDYDGYRLRVEFPRSGRGAGGRGGGGGGGGSGGGGGGGGGGGGGGGAPRGR
YGPPSRRSEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYA
VRKLDNTKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNSRSRSYSPRRS
RGSPRYSPRHSRSRSRT
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgatcagttctttcacaacattatttgatcggaatggcgagggaggaagtaactcccgc
catcttgtgtccgctccgaatctctcatcgagggtctgcttggcttccatcgcccttttt
ctttacaagccgtctgcctttaaagccatcaagctggatacgtcagcgggcggcgtgatt
agggggccggcgggaaacaacgactgccgcatttatgttggcaatctcccgcccgacatc
cgcaccaaggacattgaggacgttttctacaagtatggagctatccgggatatcgatcta
aagaaccgcagaggcgggccgccgttcgcttttgtggaattcgaagacccgagggatgca
gaagatgctgtctatggcagagatggctatgattatgatggctatcgtttgcgtgttgag
tttccaagaagtggcagaggagctggaggcagaggaggagggggtggtggtggaggcagc
ggcggtggtggtggtggtggtggtggcggcggtggtggaggaggagctccacgagggaga
tacgggcctccatcaagacgttccgaatacagagtggttgtgtcggggttgcctccaagt
ggcagctggcaggacttaaaggatcacatgcgtgaagcaggtgatgtatgttatgccgat
gtattcagagatggtactggagttgtggagtttgtgaggaaggaagatatgacctatgca
gtacggaagctggataacactaaatttaggtctcatgagggagagactgcctacattcgt
gttaaggtagatggtccaagaagccccagctatggaagatcgcggtcacgcagccgtagt
cgtagcaggagccgtagcagaagcaacagccgcagccgaagttactctccaagaagaagc
cgtggttctccacgttactctccccgccacagcagatctcgctctcgtacataa
DBGET
integrated database retrieval system
