Xenopus laevis (African clawed frog): 399260
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Entry
399260 CDS
T01010
Symbol
msi2.S, msi2, msi2.L, Msi2h, musashi-2, musashi2, xrp1
Name
(RefSeq) musashi RNA binding protein 2 S homeolog
KO
K14411
RNA-binding protein Musashi
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
399260 (msi2.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
399260 (msi2.S)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
399260 (msi2.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
399260
NCBI-ProteinID:
NP_001084027
Xenbase:
XB-GENE-865813
UniProt:
Q91920
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All DBs
Position
2S:complement(95393723..95829638)
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AA seq
406 aa
AA seq
DB search
MEADGSQATSGSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFNKFGEIRECMVMRDPTTKR
SRGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN
TVVEDVKQYFEQYGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEKVCEIHFHEINNKMV
ECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATYGRGYPGFAPSYSYQ
FPGFPAATTYGPVTAAAVAAARGSGIPDYGFYTTPGDQRATLSFADYGSMGPRTAQMLRS
EHAASASNSPLHHLPSPDQFKSPVLNSYSAQPNYGTPASPTGTNPGRPGGFPGANSPGPV
ADLYGTASQDSGVGNYISAASPQPGSGFSHGMAGPLIATAFTNGYH
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagatgggagccaggccacctctgggagtccgaacgattctcagcacgacccc
ggtaaaatgttcatcggcggcctgagctggcagacctccccagatagcctcagagactat
tttaacaaatttggagagatcagagaatgcatggtgatgagggaccccaccacaaagcga
tccagaggcttcggtttcgttacgtttgcagatcctgcaagtgtagataaagtattagct
caaccccatcatgaattagattccaagacgattgacccaaaagttgcatttcccagaaga
gcacagcccaagatggtcacaagaacaaagaaaatttttgtaggtggattatcagcgaac
acggtagtagaagatgtaaagcaatattttgaacagtatggaaaggtagaagatgccatg
ttgatgtttgacaaaacaacaaacagacatagaggttttggctttgtaacctttgaaata
gaagatgttgtggagaaagtatgtgaaattcatttccatgaaataaacaacaaaatggtt
gaatgtaagaaagcacagcctaaggaagtcatgtttcctcctggtacgagaggacgagca
aggggtcttccttacaccatggatgcgttcatgctagggatgggaatgctgggttaccca
aattttgttgcaacgtatggccgaggatatcccggatttgccccaagctacagctatcag
tttccaggttttcctgcagcaacaacttatggaccagtaacggcagcagctgtggcagca
gctagaggatcaggaatcccagattatggtttctataccacgcccggtgaccaacgggct
acgttatcgtttgcggactacggttccatggggcctcgaacagctcagatgcttcgtagt
gagcatgctgcttcagcaagtaattcccccctccatcaccttcccagcccggatcagttt
aagagcccagtcttgaatagctacagtgctcaaccgaattatggcacacctgcttccccg
acaggcaccaacccgggtcgtccaggaggattcccaggggcaaatagcccaggcccagtc
gctgacctctatggaactgccagccaggactccggtgtgggtaactacattagtgcggca
agtccacaaccaggctctggctttagccacggaatggctggccctttgattgcaacggct
tttacaaatggataccattga
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