Xenopus laevis (African clawed frog): 399267
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Entry
399267 CDS
T01010
Symbol
hoxd1.S, hoxd1, Xhox.lab, Xhox.lab1, xhoxd1, Xlab, Xlab-1
Name
(RefSeq) homeobox protein Hox-D1
KO
K09301
homeobox protein HoxA/B/D1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
399267 (hoxd1.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
399267 (hoxd1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
DUF7255
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
399267
NCBI-ProteinID:
NP_001084035
Xenbase:
XB-GENE-482735
UniProt:
Q08820
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All DBs
Position
9_10S:complement(68818412..68821437)
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AA seq
322 aa
AA seq
DB search
MNSYLEYTSCGDVLAFSPKFCRSDHRNMNLQPYPRSGADHSFMPVGGVPGSVAHQAPHQS
PALYAPCSLDVAYEPTPPSDYSFLHSSPDYDYYGSNHQIEETGGHIPYGSSLFPGNGSYI
LNGQLSYSPLGEETPNGPGGKEPLEVYPGGNLQSISPLPGTYPKPASPASDSYVSTFDWM
KVKRNPPKKSIPSEYGVTSPPCNVRTNFTTKQLTELEKEFHFNKYLTRARRIEIANSLQL
NDTQVKIWFQNRRMKQKKREREGTLPNSPPSGPASNFCVKPPHLKSVNETATLSHPRTLH
PRDSKQETKYVGLSAAPQASQN
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaattcctacctagaatacacttcttgcggggatgttttagctttttcacccaagttc
tgccgcagcgaccacagaaacatgaacttgcagccttaccctagaagtggagcagatcat
tcctttatgccagtcgggggtgtgcccggatcagttgcccaccaggctccacaccagtct
ccagcactttatgctccttgcagcctggatgtcgcctatgagccgaccccaccttctgac
tacagtttcttgcacagcagccccgattacgattattatggatctaatcaccagatagaa
gagactggggggcacattccctatggtagctcactatttccaggcaatggatcttacatc
ctcaatgggcagctgagctacagccctcttggagaagaaactccaaatggcccaggtggt
aaggaaccactagaagtttatcctgggggcaacttgcagagtatctcccccttgcctggg
acttacccaaaacctgcctccccggcatctgacagctatgtcagcacgtttgattggatg
aaagttaaaaggaaccctcctaagaagagtataccatctgaatatggggtaacaagtccc
ccctgcaatgtgaggacaaatttcaccaccaaacaactgactgagctcgaaaaggagttt
cactttaacaagtatctcacaagagcaaggcgcatcgaaatcgcaaactctctgcagctc
aacgatacccaggttaagatctggttccagaacagaagaatgaaacaaaagaaaagggaa
agggagggaactttgcccaactctcccccatccggacccgcgtctaacttctgcgtaaaa
cctccacatttgaagtctgtaaatgagactgcgacactgtcgcatccaaggacgcttcac
cctagagactcaaagcaagaaaccaaatatgtgggattgtctgctgcaccccaagccagc
caaaactaa
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