Xenopus laevis (African clawed frog): 399270
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Entry
399270 CDS
T01010
Symbol
lhx5.S, lhx5, lim5/Lhx5, Xlim5
Name
(RefSeq) LIM/homeobox protein Lhx5
KO
K18493
LIM homeobox protein 5
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
399270 (lhx5.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
399270 (lhx5.S)
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GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
399270
NCBI-ProteinID:
NP_001084038
Xenbase:
XB-GENE-865965
UniProt:
P37137
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Position
1S:135251997..135275761
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AA seq
402 aa
AA seq
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MMAHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKTDFFRRF
GTKCAGCSLGISPSDLVRKARNKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCKEDYI
SASSLKESSLNSVSSCTDRSLSPDIQDPIQDESKETDHSTSSDKETANNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFIATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLGGRLDESEILSSGPYSYYGDYQGDYYGSGNYDFFPHGPP
SSQTQSPADSSYLQNSGPGSTPLGPLESQLSGHHPSENQRYVDMISHPDTPSPEPGMTGP
LHPISGEVFTGGPSPPFSMSNNSGFSGPLPHQNLDINEATVW
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatggcccattgcgctgggtgtgagaggcccatcctggaccgatttcttcttaatgtc
ctggacagagcctggcatgtcaaatgtgtgcagtgctgtgagtgcaagtgcaacctgacc
gaaaaatgcttctccagggagggcaagctctactgcaaaactgacttcttcaggagattt
ggcaccaaatgtgcaggatgctcccttgggatctctccaagtgacttggtcaggaaagcg
aggaataaggtgtttcacctgaactgtttcacctgcatggtgtgcaataagcagctctca
acaggcgaggaactctacatcatagatgaaaacaaatttgtctgcaaagaggattatatc
agtgccagcagtctgaaggaaagcagcctcaactcagtgtcttcttgcacagacagaagt
ttgtctccagatatccaagaccccatacaggatgagagcaaagagacagaccactccaca
tcttcggacaaagagacagctaacaatgagaatgaggaacagaactctggtactaaaaga
aggggaccccggacaactattaaggccaagcaactggagacccttaaggctgcttttatt
gccacccctaagcccaccagacatattcgggaacagctagctcaggaaacagggcttaac
atgcgggtgattcaggtttggttccaaaaccgaagatccaaggaaaggagaatgaagcag
ctcagcgctttgggggccaggaggcatgcttttttcaggagtccaaggcgtatgcgaccc
ctgggaggaaggctggatgagtcagaaatcctgagctctgggccttacagttactatgga
gattatcaaggagattattatggaagtggaaattatgacttttttcctcatggaccacca
tcttcccagacacagtccccagcagactctagctatctacagaattctggacctggttca
acccctttaggtcctttagaatctcagctttctggacaccacccttcagaaaaccaaaga
tatgtggacatgatttcccatcctgacactcccagtcctgagccgggtatgactggcccc
ctccatcctatttctggtgaagtcttcactggtggtcctagtcctcccttttctatgtct
aacaatagtggctttagtggtcctctgccccatcagaaccttgacattaatgaagccact
gtatggtaa
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