Xenopus laevis (African clawed frog): 399271
Help
Entry
399271 CDS
T01010
Symbol
msi1.S, msi-1, msi1, msi1h, Musashi, Musashi-1, Musashi1, XNrp-1
Name
(RefSeq) musashi RNA binding protein 1 S homeolog
KO
K14411
RNA-binding protein Musashi
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
399271 (msi1.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
399271 (msi1.S)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
399271 (msi1.S)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_11
Motif
Other DBs
NCBI-GeneID:
399271
NCBI-ProteinID:
NP_001084040
Xenbase:
XB-GENE-865981
UniProt:
Q91807
LinkDB
All DBs
Position
1S:complement(140687117..140710102)
Genome browser
AA seq
347 aa
AA seq
DB search
METEAPQPGLSPPDSAHDPCKMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRS
RGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNT
TVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEGEDIVEKICDIHFHEINNKMVE
CKKAQPKEVMSPTGSVRGRSRVMPYGMDAFMLGIGMLGYPGFQAATYASRSYTGIAPGYT
YQFPEFRVERTPLPGAPVLPELTAIPLTAYGPVAAAAAAVVRGSTPTRTGGFLGTSSPGP
MAELYGAANQESAVSSYISAASPAPSTGFGHSLGGPLIATAFTNGYH
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggagacagaagcgccccagcccggactgtcgcccccggactccgcgcacgatccctgc
aaaatgttcattgggggactgagctggcagacaacacaagagggactgcgggagtacttc
agtcattttggggatgtaaaagagtgtcttgtcatgagagatccattgaccaaaagatca
aggggtttcggatttgtaactttcatggaccaagcgggagtggacaaagttttggctcaa
tcacgacatgagctggactcaaagacgattgatccaaaagtagcatttcctcgtagagct
caacccaagatggtaacacggacaaagaagatttttgtagggggcttgtcagtgaataca
acagttgaagatgtgaaacagtattttgagcaatttgggaaggtggatgatgccatgtta
atgtttgataaaacaacaaacaggcacagaggattcgggtttgtgacttttgaaggagag
gatattgtggagaaaatttgcgatattcacttccatgagatcaacaataagatggttgag
tgtaagaaggcccaacccaaggaggtgatgtcaccaacaggatctgtgagaggccgatct
cgggtcatgccctatggaatggatgctttcatgctgggaataggcatgctaggatacccg
ggatttcaggcagctacatatgccagtcgcagctacacaggcattgctcctgggtatact
tatcagttcccagagtttcgtgtagagagaacccctctcccgggcgccccagtcctccca
gaactcacagctatccccctgacggcatatggtcctgtagcggcagcagctgcagcagtg
gtgagaggctccactccaacccgcacaggggggtttcttggaacaagcagcccaggacca
atggcagaactttatggagcagccaatcaagaatcggcagttagcagctatatcagtgca
gcaagcccagcacccagcacaggctttggacacagccttgggggtcctctgattgccact
gctttcaccaacggctaccactga
DBGET
integrated database retrieval system
