KEGG   Xenopus laevis (African clawed frog): 399292
Entry
399292            CDS       T01010                                 
Symbol
elavl1.L, elav1, elavl1, elavl1-a, elavl1-b, elrA, hua, hur, melg, p36, Xel-1
Name
(RefSeq) ELAV-like protein 1-A
  KO
K13088  ELAV-like protein 1
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    399292 (elavl1.L)
   03041 Spliceosome [BR:xla03041]
    399292 (elavl1.L)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     399292 (elavl1.L)
   mRNA cycle factors
    Stress granule specific factors
     399292 (elavl1.L)
Spliceosome [BR:xla03041]
 Common components
  Common spliceosomal components
   General mRNP proteins
    399292 (elavl1.L)
SSDB
Motif
Pfam: RRM_1 RRM_5 BRAP2
Other DBs
NCBI-GeneID: 399292
NCBI-ProteinID: NP_001084078
Xenbase: XB-GENE-6254178
UniProt: Q1JQ73 A0A974E030
LinkDB
Position
1L:114085058..114111126
AA seq 337 aa
MSNGYEDHMDDVCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGFE
MRSSSLSKGHSLGYGFVNYLNAKDAERAINTLNGLRLQSKTIKVSFARPSSESIKDANLY
ISGLPRTMTQKDVEDMFLPFGHIINSRVLVDQATGLSRGVAFIRFDKRSEAEEAIASFNG
HKPPGSSEPITVKFAANPNQNKNVALLSQICHSPARRFGGPVHHQAQRFRFSPMGVDHMS
SISSVNVASSATSGWCIFVYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGF
VTMTNYEEAAMAIASLNGYRLGDKTLQVSFKTSKSHK
NT seq 1014 nt   +upstreamnt  +downstreamnt
atgtctaacggttatgaagatcacatggatgacgtgtgcagggatgacattggtaggacc
aatctgattgtgaactacctgcctcagaacatgacacaagatgaactgcgaagccttttc
agcagtatcggagaggtagaatctgcaaagcttatacgggataaagttgcgggctttgag
atgaggagcagctcattatccaaagggcacagtttagggtatggttttgtgaattacctt
aatgcaaaagatgcagaaagagcaataaacactcttaatggcctgaggctccaatcaaaa
actataaaggtctcctttgctcgcccaagttcagaatccattaaagatgcaaatttgtac
atcagtgggctcccaaggacaatgacgcagaaagatgtagaagatatgtttttaccattt
gggcacattatcaattcacgagtgctggttgatcaagcaacaggtttgtcccggggtgtt
gcatttatacgttttgataaaagatcagaagctgaagaggccattgccagtttcaatggg
cacaaaccacctggatcttcagagcctattacagtaaaatttgctgccaatccaaatcag
aacaagaatgtggccctcctttcccagatttgtcattccccagctcgacgatttggaggg
cctgttcatcaccaggcacaaaggttcaggttttctccaatgggtgtagatcacatgagc
agcatatctagtgtaaatgttgcaagcagtgcgacttctggttggtgcatatttgtctac
aatcttggccaagatgctgatgaaggaattctttggcaaatgtttggcccttttggagct
gtcactaatgtcaaggttattcgtgattttaacaccaacaaatgtaaaggttttggtttt
gtgaccatgacaaactatgaagaagcagcaatggctattgcaagtcttaatggctaccgt
ttaggggacaaaaccttacaagtttccttcaaaaccagcaagtcacacaaataa

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