Xenopus laevis (African clawed frog): 399304
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Entry
399304 CDS
T01010
Symbol
nr6a1.S, gcnf, xEmGCNF
Name
(RefSeq) nuclear receptor subfamily 6 group A member 1
KO
K08561
germ cell nuclear factor
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
399304 (nr6a1.S)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xla03310
]
399304 (nr6a1.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Zinc finger
Cys4 germ cell nuclear factor
399304 (nr6a1.S)
Nuclear receptors [BR:
xla03310
]
6. Germ cell nuclear factor
6A. Germ cell nuclear factor receptor
399304 (nr6a1.S)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF7466
Motif
Other DBs
NCBI-GeneID:
399304
NCBI-ProteinID:
NP_001084102
Xenbase:
XB-GENE-487596
UniProt:
P70033
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Position
8S:complement(40484811..40631144)
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AA seq
435 aa
AA seq
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MDTWEDDRVDQRACLICGDRATGLHYGIISCEGCKGFFKRTICNKRVYRCSRDKNCVMSR
KQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISDEEVERIMSGQEFEEEA
NTSWSNNGDSDHSSPGNAVSESNQPSPVSTPSSSRSMELNGFSSLRDQYLGTPGPTHYQY
LPHLFSFSAHPTIIPAQSRSLDPQSHTLINQLLTAEDIEPLNTPMLIEDGYKVTQSELFA
LLCRLADELLFRQITWVKKLPFFCDLSIKDYTCLLSTTWQELILLSSITTYSKQIFGDLT
DVTSKYSPSEDELHRFSEDGMEVMERLIYLFRKFSQLKVSNEEYVCMKAINFLNQDIQGI
SSASQVEQLNKRYWYVCQDFTEYRYPHQPNRFPDLMMCLPEVRYIAGKLVNVPLEQLPLL
FKAFLHSCKTIVTKE
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggacacatgggaagatgaccgcgttgatcaaagagcgtgccttatctgcggggaccgt
gccacaggattgcattatggcatcatctcttgcgagggctgcaagggattcttcaagcgc
acgatctgcaacaaacgtgtatatagatgcagtcgggacaagaactgcgttatgtcgcgc
aagcaaaggaaccgctgccaatactgcaggttactcaagtgcctccagatggggatgaat
cgcaaagcaattcgtgaagatggaatgcctggaggaaggaacaagagcattggtcctgta
cagatctcagatgaagaggttgagcggataatgtctggacaggagtttgaagaggaggcc
aatacatcatggagtaataatggtgacagtgaccacagctctcctgggaatgcagtctca
gaaagcaatcagccttctccggtgtctacaccttcctccagtcggtcaatggaactcaat
ggattcagctcactacgggaccaatatttgggaacaccaggtccaacgcactatcaatac
ctacctcatctctttagcttctccgctcaccccacaataatcccagcccagtcacgaagt
cttgacccccagtcacacaccctcattaaccaactgctgacggctgaggatatagaacct
ctcaatacacctatgcttatagaggatgggtacaaagtgacccagtctgagctgtttgct
ttgctgtgccggctggcagatgagctgctgttccggcagatcacttgggtaaagaagctg
ccgtttttctgtgatttgtccatcaaggactacacatgtctgctcagcacaacgtggcag
gagctgatattgctctcgtcgatcaccacatacagtaagcagatctttggagacttgacc
gacgtcacttccaagtactctccttctgaggatgaattgcacaggtttagtgaggacggt
atggaagtgatggagcgacttatctatttgttccgcaagttcagccaactcaaagttagt
aatgaagagtatgtctgcatgaaagccatcaacttcctaaatcaagatatccagggcata
agcagtgcctcccaggtggaacaactgaacaagcgatactggtatgtgtgccaagacttc
accgagtacaggtacccacaccagccgaacaggttcccagaccttatgatgtgcctacct
gaggttcgctacattgctggaaaactggtgaatgtgcctctggaacaacttccactgcta
ttcaaagcctttcttcactcgtgcaaaactattgtaaccaaggagtga
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