Xenopus laevis (African clawed frog): 399310
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Entry
399310 CDS
T01010
Symbol
opn1lw.L, opn1lw, opn1lw1
Name
(RefSeq) red-sensitive opsin
KO
K04251
long/medium wavelength-sensitive opsin
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
xla04030
]
399310 (opn1lw.L)
G protein-coupled receptors [BR:
xla04030
]
Rhodopsin family
Vision
Opsin
399310 (opn1lw.L)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srw
7TM_GPCR_Sru
7TM_GPCR_Srsx
Cytochrom_B_N_2
DUF2975
MpPF26
Motif
Other DBs
NCBI-GeneID:
399310
NCBI-ProteinID:
NP_001084114
Xenbase:
XB-GENE-955013
UniProt:
O12948
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All DBs
Position
8L:12779144..12785390
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AA seq
365 aa
AA seq
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MASQLNEAIFAARRRNDDDDTTRSSVFTYTNSNNTRGPFEGPNYHIAPRWVYNLTSIWMI
FVVFASVFTNGLVIVATLKFKKLRHPLNWILVNMAIADLGETVIASTISVFNQIFGYFIL
GHPMCVLEGFTVSTCGITALWSLTVIAWERWFVVCKPFGNIKFDEKLAATGIIFSWVWSA
GWCAPPMFGWSRFWPHGLKTSCGPDVFSGSSDPGVQSYMLVLMITCCIIPLAIIILCYLH
VWWTIRQVAQQQKESESTQKAEREVSRMVVVMIVAYIFCWGPYTFFACFAAFSPGYSFHP
LAAALPAYFAKSATIYNPIIYVFMNRQFRNCIYQMFGKKVDDGSEVSSTSRTEVSSVSNS
SVSPA
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacaattgaatgaggcaatatttgctgctcggaggagaaacgacgatgatgac
acaacaagaagtagtgtgttcacatatactaacagcaacaacacaagaggtccatttgaa
ggtccaaattaccacattgccccacgatgggtctacaacctcacttcaatctggatgata
tttgttgtttttgcttctgtgttcactaatggcttggtcattgtagccactttaaaattc
aagaaacttcgacaccctctgaactggattcttgtcaatatggctattgcagatcttgga
gagacagtcattgccagtaccatcagtgtcttcaaccagatatttggttactttattctc
gggcacccgatgtgtgttttagaaggcttcactgtatcaacctgcggtatcactgctctg
tggtctctgacggtcattgcttgggaaagatggtttgtggtctgtaaaccttttggaaac
attaaatttgatgaaaagctggcagctaccggtatcattttctcttgggtttggtctgca
ggctggtgtgcacctccaatgttcggatggagcaggttttggcctcacggcttgaagaca
tcatgtggtccagatgtattcagtggcagctcagaccctggagttcagtcatacatgctt
gtccttatgattacatgctgcatcatccccttggctatcattatcttgtgttatttgcat
gtatggtggaccattcggcaggttgcccagcagcagaaggaatcagaatccactcagaaa
gctgaacgagaagtatcccgtatggtggtagtgatgattgtcgcttatatcttctgctgg
gggccctacactttctttgcctgttttgctgctttcagcccaggttacagcttccacccg
ctagcagctgcattgcctgcctactttgccaagagtgccaccatttacaatccaattatc
tatgtctttatgaacagacagttccgaaactgtatctatcaaatgtttggcaaaaaggtc
gatgatggatcagaagtgtcctctacttctagaacagaggtgtcatctgtctccaactcg
tccgtgtcccctgcataa
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integrated database retrieval system
