Xenopus laevis (African clawed frog): 399317
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Entry
399317 CDS
T01010
Symbol
ubtf.L, ubf, ubf1, Ubtf, ubtf-a, ubtf-b, xUBF, xUBFbeta2
Name
(RefSeq) nucleolar transcription factor 1-A
KO
K09273
upstream-binding transcription factor
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
399317 (ubtf.L)
03021 Transcription machinery [BR:
xla03021
]
399317 (ubtf.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
399317 (ubtf.L)
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
399317 (ubtf.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
399317
NCBI-ProteinID:
NP_001095257
Xenbase:
XB-GENE-6254049
UniProt:
P25979
A0A974BX16
LinkDB
All DBs
Position
9_10L:5181582..5192769
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AA seq
677 aa
AA seq
DB search
MNGAAGGVTQAKMTAPKDQDPWSQDEMLTLIQTMKTLLPSQDNSKFKTTESHLDWNKLAF
KNYSGSMCRQKWMEISNEVRKFRTLSELILDAEEHVRHPYKGKKLKKHPEFPKKPLTPYF
RFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKLEFERNLARFR
EEHPDLMQNPKKSDVPEKPKTPQQLWYNHERKVYLKLHADASTKDVKDALGKQWSQLTDK
KRLKWIHKALEQRKQYEGIMREYMQKHPELNIAEEGITRSTLTKAERQLKDKFDGRPTKP
PPNSYSMYCAELMANMKDVPSTERMVLCSQRWKLLSQKEKDAYNKKCEQRKKDYEVELMR
FLESLPEEEQQRVLAEEKMVRSRSGQADKKKAADERAKLPETPKTAEEIWQQSVIGDYLA
RFKNDRAKALKSMEGTWLNMEKKEKIMWIKKAAEDQKRYERELSDMRATPTPTTAGKKVK
FLGEPKKAPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWHRISPSQKDYYKKLAEDQ
QRVYRTQFDTWMKGLSSQDRAAYKEQNSNKRKSTAKIQVPVAKPKLVAQSKSDDDDEDDD
DDEDEDDDDDEDEDKEDSSEDGDSSESSSDEDSEDGEENEDEEGEEDEDEEEDDDDNESG
SSSSSSSSADSSDSDSN
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgaacggagcagctggtggtgtcacacaagcaaaaatgacggccccaaaagatcaagac
ccatggtcccaggatgaaatgttgactctcatacaaaccatgaagaccctcctgcccagc
caggacaactccaagttcaagaccacagagtcccacctggactggaacaagttggccttc
aagaactattccggttccatgtgtcgccagaagtggatggaaatctccaatgaggtcagg
aagttccggactctctcggagttgatcctggatgcggaggaacatgtgagacatccatac
aaaggcaaaaagctgaagaaacaccccgagtttcccaagaagccactcaccccttacttc
cgctttttcatggagaagagagctaaatatgcaaagctgcaccccgaaatgagtaatctg
gatctcactaagattctgtccaaaaagtacaaagagctgccagagaagaaaaagatgaaa
tacatccaggacttccaaagagagaagctggagtttgagaggaacctggctcgattcagg
gaggagcatcctgatctcatgcaaaatccaaagaagtctgatgtcccggagaagcccaag
acccctcagcagctgtggtacaaccacgagaggaaggtctacctgaaactgcatgcagat
gccagcactaaagacgtgaaggacgcattagggaagcagtggtcccagttgactgataaa
aagcgcctgaaatggatccataaggccctggagcaacgcaagcaatatgagggcataatg
agggaatacatgcagaagcacccagaactcaacatcgcagaagagggcatcactcgctca
actctcaccaaggctgagcgccagctgaaggacaagtttgatggccggccaaccaagcct
ccaccgaacagttactccatgtactgtgcagaactgatggccaacatgaaggacgttccc
agcacagagcgcatggtcctctgcagccaaaggtggaagctgctctcccagaaggagaag
gacgcctacaacaagaagtgcgagcagagaaagaaagactatgaagtggagttgatgcgt
ttccttgagagtctcccagaagaggagcagcagagggttctggctgaagaaaagatggta
aggagcagatctggacaggccgacaagaagaaagcagcagatgagagggccaaactcccg
gagactcccaaaaccgccgaagaaatctggcaacaaagcgtgattggagactatcttgct
cgcttcaagaatgaccgcgctaaagccctgaagagcatggagggcacgtggttaaatatg
gagaaaaaggagaaaatcatgtggataaagaaggcagcagaggaccagaaacgatatgag
agagaactaagtgatatgcgtgccactccgaccccaacgacagcaggaaagaaggtcaag
ttcctgggagaacccaagaaagcacccatgaatggctaccagaagttctcccaggagctc
ctgtccaacggagaactcaaccacctcccccttaaggaacgtatggtagaaattggaagc
cggtggcacaggatttctccctctcagaaggactattacaagaagctggcagaggaccaa
cagagggtctatcgtactcagtttgacacctggatgaagggtttatcgtcacaagaccgg
gcagcatacaaggaacagaattcaaataaacgcaaaagtacagcgaaaatacaggttccc
gtcgcaaaacccaaattagtagctcagagcaaatcggatgatgatgacgaagatgatgat
gacgacgaggatgaagacgatgatgacgacgaggatgaagataaggaggactcgtctgaa
gatggagactcttcagagtctagcagtgatgaggacagtgaggatggagaagagaacgaa
gacgaagaaggcgaggaggacgaggatgaagaagaggacgacgatgacaacgaatcggga
tccagctcttcttcctcctcttctgcagactcttcagactcggactctaactga
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