Xenopus laevis (African clawed frog): 399346
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Entry
399346 CDS
T01010
Symbol
vldlr.S, vldlr
Name
(RefSeq) very low-density lipoprotein receptor precursor
KO
K20053
very low-density lipoprotein receptor
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
399346 (vldlr.S)
Membrane trafficking [BR:
xla04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
399346 (vldlr.S)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
EGF_LRP2
EGF
Motif
Other DBs
NCBI-GeneID:
399346
NCBI-ProteinID:
NP_001084168
Xenbase:
XB-GENE-971963
UniProt:
O42126
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Position
1S:complement(118189747..118232389)
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AA seq
869 aa
AA seq
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MSRSWRGVVLLLLLCFCLYPDLGLVHATTTLCEESQFQCGNGRCITSLWKCDGDEDCSDG
SDESSCVKKTCAESDFVCRNGQCVPSRWECDGDPDCEDGSDETPELCYMRTCRATEISCG
VRSTQCIPLSWKCDGERDCANAEDEENCGNITCSPSEFTCSSGRCISSTFVCNGQNDCSD
GSDEVNCVPPTCGAHEFQCKNFSCIPLSWVCDDEPDCADHSDESLEQCGRQPIAPQRCSA
NEMPCGSGECIHKKWRCDGDADCKDKSDEINCPSRTCQPDQFKCEDGNCIHGSRQCDGVR
DCLDGTDEIRCKNVIQCSVPGKFKCKSGECIESNKVCNKHKDCKDWSDEPVKDCEVDECL
ENNGGCSHICHDLPIGYECECTAGFKLIDRKTCGDIDECQNPEICSQICVNLKGGYKCEC
SKGYQMDPSTGVCKAVGREPCLIFTNRRDIRKVGLERKEYIQLVEQLRNTVALDADIKEQ
SLFWADTIQKAIFRAPFDTREKVGSHVKVVEDVHSPSAIAIDWIYKNIYWIDTILKTISV
SNFDGSKRKTLFSSELQDLTSIAVDPISGFIYWSDCGEPAKIEKAGMNGIDRQQLITADV
QRPSGIAIDVVKSRLYWVDSKLHTLSSVDLNGQDRRVILKSHEFLAHPLALTIFEDRVYW
IDGENEAIYGANKFSGQELETLVNNLNDAQDIIVYHELIQPLGINWCNEQIENGGCKYLC
LPAPQISDRSPKYTCACPDGFEVHEGRSCRAGSKATMDHPVKPTGIMPNKPLPSGNNDTA
SVYEVNQSAKGTSAAWAILPLLLIAMAASGGYLMWRNWQRKNMKSMNFDNPVYLKTTEED
LAIDIGRHSGNIGHTYPAISVVNTDDDLS
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctcctggaggggggttgtcctgctcttgctgctctgcttctgtctgtacccg
gatctcggcttggttcacgcaacaacaaccttatgtgaagagagtcagtttcagtgtggg
aatggacgctgcattacttcactgtggaaatgtgatggagatgaagactgctctgatgga
agcgacgagagctcatgtgtgaagaaaacctgtgcagaatctgactttgtttgtcgtaat
ggtcagtgtgttcctagccgatgggagtgtgatggagacccagactgtgaagatggatca
gatgaaacaccagagctatgttatatgaggacatgcagagctactgaaatcagttgcggt
gtgcgttcaacacagtgcattcccctctcctggaaatgtgatggcgagcgtgactgtgca
aatgcagaggatgaagagaactgtggaaatataacttgtagtccatctgagttcacttgc
tccagcggccgttgcatttccagcacttttgtctgcaatggccagaatgactgcagtgat
ggaagtgatgaagtgaactgtgttcctcctacatgtggcgctcatgagtttcagtgcaag
aatttctcctgcatccctcttagctgggtttgtgatgatgagccggactgtgcagaccac
tcggacgagtcactggagcagtgcggtcgccagcccattgctccccagaggtgcagtgcc
aatgaaatgccttgtggctctggagaatgcattcacaaaaagtggcgctgtgatggagac
gcagattgcaaggacaagagtgatgagatcaattgcccatctcgcacttgccaaccagac
caatttaaatgtgaggatggaaattgtattcatggcagtagacaatgcgatggtgtgaga
gactgccttgatggcactgatgaaatacgctgtaaaaatgtcattcagtgctcagtacct
ggtaaattcaagtgcaaatctggagagtgcatcgaaagtaacaaggtttgcaacaagcat
aaagactgcaaggactggagtgatgagccagtaaaggattgtgaggttgatgaatgtctg
gagaataatggtggctgttctcatatatgccatgacctgcctattggctatgaatgtgaa
tgcactgctggctttaagctaattgaccggaaaacatgtggagatattgacgaatgccaa
aatccagaaatctgcagccagatctgtgtgaacctgaaaggaggctacaaatgtgaatgc
agtaaaggatatcagatggatccatccactggtgtatgcaaggcagtaggaagggagcca
tgtctgatcttcaccaaccgcagggatatccggaaggttggacttgaaaggaaagaatac
atccagctggtggagcagttgaggaatacagtagcactggacgctgatataaaagaacaa
agcttattctgggcagacactatccagaaagccatttttcgtgccccatttgacacccgg
gaaaaagtaggctcccatgtcaaggttgtggaagatgtgcacagtccatcagcaattgca
attgactggatctacaaaaatatatattggatagatactattttaaagaccatttctgtg
tctaattttgatggctccaaaaggaaaaccttgttcagttcagagctgcaagatctaacc
tccattgcggttgatccaatatctgggtttatttactggtctgactgtggagagcctgcc
aaaattgaaaaagctggaatgaatggaatagacagacaacagttgataacagcagatgtg
caaagacctagtggcattgcaattgatgtggtaaaaagccgtttatattgggttgattcc
aaactgcatacactctctagtgtggacctcaatggtcaggatcgcagagtcattctgaaa
tctcatgaattccttgctcatcctcttgcacttactatatttgaggatcgtgtctactgg
attgatggtgagaatgaagcaatctatggggccaacaaattttctgggcaagagcttgaa
actttagtcaataatttaaatgatgcccaagatataatagtctaccatgaactcatccaa
cccctaggtataaactggtgcaatgaacagatagaaaatggcggctgtaaatatctgtgt
ttaccggctccgcagataagtgatcgttcacccaagtatacttgtgcttgtcctgatggc
tttgaagtacatgaaggaaggagctgcagagcaggtagtaaagctactatggaccaccct
gtcaaacctacaggaataatgcctaataaaccacttccaagtggtaataatgacactgct
tctgtgtatgaagtaaatcagtctgccaaagggacctctgctgcatgggcaatccttccc
cttttgttaatagcaatggcggcttctgggggttacctgatgtggcgcaactggcaacgg
aaaaatatgaaaagcatgaacttcgataatccagtgtacttaaaaacaacagaggaggac
ttggcaatagatattggaaggcatagtgggaatataggccacacatatccagcaatctct
gttgtaaacacagatgacgacttgtcctga
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