Xenopus laevis (African clawed frog): 399351
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Entry
399351 CDS
T01010
Symbol
bgn.L
Name
(RefSeq) biglycan
KO
K08118
biglycan
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
399351 (bgn.L)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xla00535
]
399351 (bgn.L)
Proteoglycans [BR:
xla00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class I
399351 (bgn.L)
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Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRRNT
LRR_5
LRR_9
LRR_14
UAE_UbL
Motif
Other DBs
NCBI-GeneID:
399351
NCBI-ProteinID:
XP_041429161
Xenbase:
XB-GENE-17331698
UniProt:
B7FEW6
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Position
8L:13516638..13544859
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AA seq
368 aa
AA seq
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MKVLLLLCSCILVIHALPFEQRGFWDFSMDDGMAMMKDEEASGVGPIPTESIPDVGLPPM
DLCPFGCQCHLRVVQCSDLGLTSIPKNLPKDTTLLDLQNNKITEIKKDDFKGLTNLYALV
IVNNKISKINEKAFEPLQKMQKLYISKNNLEEIPKNLPKSLVELRIHENKIKKVPKGVFS
GLKNMNCIEMGGNPLENGGIEAGAFDGLKLNYLRVSEAKLSGIPKGLPSTLNELHLDNNK
IQAIEKEDLSQYASLYRLGLGHNNIRMIENGSLSFMPVLRELHLDNNKLSKVPPGLPDMK
LLQVVYLHSNNITQVGVNDFCPIGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLA
IQFGNYRK
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtattgcttctcttatgctcctgtatcttagtcatccatgccctgccttttgaa
cagagaggattctgggatttttccatggacgatggaatggctatgatgaaagatgaggag
gcctcgggagtaggtcctatacctactgagagtattccagatgttggtttgccacctatg
gatttatgcccatttgggtgtcaatgtcatttgcgtgtggtgcagtgctctgatttgggt
ctcacgtctattcccaaaaaccttccgaaagacaccactctcttggatctacagaacaac
aaaatcacggaaatcaaaaaggacgacttcaagggactcaccaacctgtatgctttggtt
atagtcaacaacaagatatcgaaaatcaatgaaaaggcctttgagcccctgcagaagatg
cagaaactgtacatctctaaaaacaacctcgaggaaatacccaaaaaccttcccaagtct
ctggtggagctgcgcattcacgaaaacaaaattaagaaggtcccaaagggcgtcttcagt
ggactgaagaacatgaactgtattgaaatgggaggaaaccctctggaaaatggaggcatt
gaggctggcgcatttgatggcttgaagctgaactacttgcgtgtttccgaggcaaaactg
tccggcatcccaaaaggtcttccaagcaccctaaatgagcttcaccttgacaacaacaag
atccaggctattgaaaaggaagaccttagccagtatgctagcctgtacaggctgggttta
ggacacaacaacatccgcatgatagaaaacggcagcttatcttttatgcctgttctgagg
gagcttcacttggacaacaacaaactctctaaagtgcccccagggctgccagacatgaaa
ttactgcaggttgtgtatctgcactccaacaacatcacccaggttggcgtcaatgacttc
tgccctataggattcggagtgaaacgcgcctactacaacggaattagtctatttaacaac
cccgtgccctactgggaagtgcagccggccacattccgctgcgtcaccgaccgattggct
atccagtttggcaattacaggaagtaa
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