Xenopus laevis (African clawed frog): 399436
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Entry
399436 CDS
T01010
Symbol
vti1a.L, vti1a
Name
(RefSeq) vesicle transport through interaction with t-SNAREs 1A L homeolog
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
399436 (vti1a.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
399436 (vti1a.L)
Membrane trafficking [BR:
xla04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
399436 (vti1a.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
CAP59_mtransfer
Laminin_II
DUF1664
Peptidase_S46
Mer2
DUF6730
Motif
Other DBs
NCBI-GeneID:
399436
NCBI-ProteinID:
NP_001084318
Xenbase:
XB-GENE-5916252
UniProt:
Q6DKB7
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Position
7L:complement(2255425..2433690)
Genome browser
AA seq
194 aa
AA seq
DB search
MSAEFEGYEQDYAVLTAEITGRVGKIPRLLGDEKKQMILNVEKQLEEARELLEQMDLEVR
EIPVQSRAMYSNRMRSYKQELGKLDADFKRSRIAYSDEVRNELLGDDGNSSESQLIKLRE
ERAHLLDNTERLERSSRRLEAGYQVAVETEQIGQNILENLSQDREKIQRARERLRETDAN
LGKSSRVLTGMLRR
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgagttcgagggttacgagcaggattatgcggtgctcaccgcggagattact
ggcagggtcgggaagatcccccggctgctgggagatgaaaagaagcaaatgatattaaat
gtagagaagcagctggaggaggcccgggaactgttggagcagatggacctggaggtgcgg
gagattccagttcagagtcgcgccatgtacagcaaccgcatgcgcagctacaagcaggag
ttgggcaaactggacgccgactttaaaaggtcacggatcgcctacagtgacgaagtgcgc
aacgagctcctgggggacgatgggaattcctcggagagccagttgataaaattacgtgaa
gagagggcacatctgttggataacaccgagaggctggaaaggtcatcgaggaggctagaa
gccggctaccaagtggcggtggagacggaacaaatcggccagaacatcctggagaaccta
agtcaggacagagagaagatccagagagcaagagaaaggctgagagagacagatgcaaat
ctggggaagagttccagggtacttacaggaatgttacgaaggtaa
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