Xenopus laevis (African clawed frog): 399447
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Entry
399447 CDS
T01010
Symbol
nup62.L, ibsn, il4i1, nup62, p62, sndi
Name
(RefSeq) nucleoporin 62kDa L homeolog
KO
K14306
nuclear pore complex protein Nup62
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
399447 (nup62.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
399447 (nup62.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
399447 (nup62.L)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Motif
Other DBs
NCBI-GeneID:
399447
NCBI-ProteinID:
NP_001084339
Xenbase:
XB-GENE-6253895
UniProt:
Q91349
A0A974H7K6
Structure
PDB
PDBj
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All DBs
Position
8L:25247288..25288795
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AA seq
547 aa
AA seq
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MSGFNFGAASAGGFSFGNPKSTTTTAPTGFSFGAATAAPSGGFSFGTATPTPASTTGQTS
GLFSFSNPAPSLAPTSGFSFGAQVTSTPAPSSGGLAFGANTSKLNSGVGNQPAGGTTQTS
QPMGGFSFGAATTQTQPSATSVGGFSFAGGVGSTSTNVFAQPAASTGITLQSAVSTAAAP
TATTSQPTSTFSFGTQPQAAPALNFGLLSSSSVLSTASTPAAAQPVAPTTGLSLNFGKPA
DTSAAVTSTGSTTTNTPSLSSLLGTSGPSLFSSVATSTVPSVVSTVASGLSLTSTATSTG
FGMKTLASSAVPTGTLATSTASLGVKAPLAGTIVQANAVGSAAATGISTATAMTYAQLEN
LINKWSLELEDQEKHFLQQATQVNAWDRTLMQNGERITTLHREMEKVKLDQKRLDQELDF
ILSQQKELEDLLTPLEESVKEQSGTIYLQHADEEREKTYKLAENIDAQLKRMAQDLKEVI
EHLNTSAGPGDASNPLQQICKILNAHMDSLQWIDQNSALLQRKVEQVTKECESRRKEQER
GFSIAFD
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctttaactttggcgctgcttctgctggaggatttagctttgggaacccaaaa
tccaccactacaactgcccccactggcttttcctttggtgcagcaactgcagctccttct
ggtggtttcagtttcggcacagccacaccaactcctgcttctaccacaggccaaactagt
ggacttttttccttctccaatccagccccttccttagcaccaacatctgggttcagcttt
ggtgcacaagtaacatctactccagcaccttcctcaggtggtcttgcttttggggcaaac
acatccaagttgaattcaggagtaggaaatcagcctgccggtggcaccactcagacatcc
caacccatgggaggtttctcatttggagctgcaacaacgcagactcagccatccgccacc
agcgttgggggtttctcttttgctggtggagttgggtctacgtctaccaatgtctttgca
caacccgcagcttctaccgggatcaccttgcagtcagcagtttcaacagctgcagctccg
actgctaccacctcccagcctaccagtacctttagctttgggacccaaccacaagcagcc
cctgctttgaactttggtttgctgtcatcaagttctgttctttccactgcctctactcca
gctgccgcacagccagtagcacccacaacaggacttagcctgaactttggcaaaccagca
gacacatcagcagctgtgacatccacgggatccaccacaacaaacacaccttccctttct
tcccttctgggaacatctgggccctctctcttctcctctgtggcaacttcaactgtgcca
tctgttgtgtcaacagtagcaagtggactgtcattaacttctactgcaacaagcacaggt
tttggaatgaagactttggcaagcagtgctgtaccaacaggaacattggcaaccagcaca
gcctctcttggtgtaaaagcaccccttgctggaaccatagttcaagctaatgctgtcggt
tctgctgcagctacgggaatcagtactgccacagcgatgacctatgcacagctggaaaac
ctgattaataagtggagtttggaattggaagatcaagaaaagcactttctgcagcaagca
actcaggtcaacgcatgggataggactcttatgcagaatggagaacggatcactactcta
cacagagaaatggaaaaagtaaaactggaccaaaaaaggttggatcaggaactggacttt
atcttgtcacagcaaaaagaacttgaggacctgctgacccctctagaggaatctgtcaaa
gagcagagtggaaccatttacctccaacatgcagatgaggagagagagaaaacgtacaag
ctggcagaaaacattgatgcccagctgaagcgcatggcccaggatctaaaggaggttata
gagcatctgaacacatcagctggaccaggggatgccagcaacccgctccaacagatctgc
aagattcttaatgcccacatggattctttacagtggattgatcagaacagtgctcttctg
cagaggaaggtcgagcaggtaacgaaggagtgtgaaagccgaaggaaggaacaggagcgt
ggcttttccatagcattcgattaa
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