Xenopus laevis (African clawed frog): 399451
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Entry
399451 CDS
T01010
Symbol
tcf12.L
Name
(RefSeq) transcription factor XE1.1 isoform X1
KO
K15603
transcription factor 4/12
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
399451 (tcf12.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
399451 (tcf12.L)
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Gene cluster
GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
399451
NCBI-ProteinID:
XP_018108522
Xenbase:
XB-GENE-5799717
UniProt:
A0A8J0US90
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Position
3L:complement(105307096..105441036)
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AA seq
709 aa
AA seq
DB search
MNPQQRMAAIGTDKELSDLLDFSAVRYPSGSSYGFFHTMFSPPVNSGKTRPTTLGSSQFS
GSGMDERSGASWGTSGQLSPSYESSRGFSDSPHYSDHLNDSRLGPHEGLSPTPFMNSNLM
GKTSDRGPFPLFGRDSAVPGCQPGLIRADIGLGSSGQLPSSGKPGSPYFPFSGSSSRRRP
LQDTPALDPVQTKKIRKVPPGLPSSVYAPSPNSDDFNRESPSYPSPKPPSSMFASTFFLQ
DGTHNSSELWNSSNGINQPGYGGMLGSASSHMSQSSNFGSLHERLNYPPHPVSPTDINAS
LPPMSSFHRGGNSNSTYVAASHTPPINGSDNLLGNRGNAAGSSQTGDALGKALASIYSPD
HTSSSFPSNPSTPVDSPSPLPGANQWSRPGGQTPSSPSYENSLHSLKNRVEQQLHEHLQD
AMSFLKDVCEQSRMEDRLDRLDDAIHVLRNHAVGPSTSMAADIHSLLGATHNGPIASLTS
NYGTPGLLANSRQTSMVANHREDSVSISSEHSVLSSTVSASNTEITHKPQDNYRALSQAL
TSLIEIKTERKEKDENIHDDVSSDDMKSDDESSQKEMKSSRGRTSSINEDEDLNPEQKVE
REKERRMANNARERLRVRDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILNLEQQ
VRERNLNPKAACLKRREEEKVSAVSAEPPNTHPGVHPGLTDTTNPMGHM
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctcaacagcggatggccgctataggaacagacaaggaactgagtgatctgctg
gatttcagtgcggtacgatatccttcggggtcttcttatggcttcttccacacgatgttt
tcaccacctgttaatagtgggaaaaccagacctactacactaggaagcagtcaattcagt
ggatctggtatggatgaaagatcaggagcctcttggggaacaagtggtcagttgagtcca
tcctatgagtcttcaaggggtttttcagacagtcctcattacagtgatcacttaaatgac
agtcgattaggcccccatgaaggattgtccccaacacctttcatgaactcaaatctgatg
gggaagacatctgacagaggcccatttccattatttggtagagattcagctgttcctgga
tgtcaacctggcctcatccgagcagatattggccttgggagctctgggcaacttccatcc
tcaggaaaacctggtagcccgtactttcctttctcggggtccagttcacgtcggagacct
ttacaggacacgcctgcacttgatcctgtacaaacaaagaaaataagaaaggtcccccct
ggcttgccttcttctgtctatgcaccatccccaaattcagacgacttcaatagagaatct
cctagttacccatcccccaagcctccaagcagtatgtttgctagcactttctttcttcaa
gatggaacacataactcatcagaactctggaattcctccaatgggatcaaccagcctggg
tatggtggaatgctgggtagtgcgtcttctcacatgtcccagtcaagtaacttcggcagc
ctacatgaacgtttgaattacccgccccatccagtgtcaccaacagatataaatgccagt
cttcctccaatgtccagcttccatcgaggtggcaactcaaattccacctatgtggctgct
tctcacactcctcctatcaatggatcagacaatctgttgggaaatcgagggaacgcagct
ggcagctcacagactggggatgcacttggaaaagctcttgcatctatttattctcctgat
cacaccagcagcagctttccatcaaatccctcaactcctgtcgactcaccttctcctctc
ccaggtgccaaccagtggtctagacctggaggacagaccccatcatcaccaagctatgaa
aattcacttcactctttgaaaaatcgggttgagcagcaacttcacgagcatttgcaagat
gctatgtccttcttaaaggatgtctgtgagcaatcccgaatggaagatcgtttagataga
ctcgatgacgcgatccacgtacttcggaatcatgcagttggaccctcaactagtatggct
gctgatatacacagcttattgggtgctacacataatggacccattgcaagtttgacctcg
aactacgggacacctggccttttagcgaacagtcgacagacttcaatggtggcaaatcac
agagaagattctgtaagcatatccagtgagcattcagttctgtcaagcacagtttctgca
tcaaacacagaaattactcacaaaccccaagacaattacagagcgttatcccaggcattg
acaagcttgatagaaatcaagactgagcgcaaagaaaaagatgagaatatccacgatgac
gtctcttcagatgatatgaaatcagatgatgaatcctctcaaaaagaaatgaaatcttca
agagggagaacaagcagtatcaatgaagatgaagatttaaatccagaacagaaagtggag
agggaaaaagaaaggagaatggcgaacaacgcgagggaacgcttgcgcgtcagagacatc
aatgaagcgtttaaagagcttgggcgcatgtgtcaactacatctaaagagcgagaaacca
cagacaaaactactcattcttcatcaggcggtagcagttatccttaatctagaacaacaa
gtcagagagaggaaccttaaccccaaagcagcctgccttaaaagaagggaagaagaaaaa
gtttctgccgtatcggcagagccaccaaacacacatccaggagttcaccctggtcttact
gatactaccaaccctatgggtcatatgtaa
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