Xenopus laevis (African clawed frog): 403373
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Entry
403373 CDS
T01010
Symbol
nbn.L, nbn, nbs, nbs1
Name
(RefSeq) nibrin L homeolog
KO
K10867
nibrin
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03440
Homologous recombination
xla04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
403373 (nbn.L)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
403373 (nbn.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xla03032
]
403373 (nbn.L)
03400 DNA repair and recombination proteins [BR:
xla03400
]
403373 (nbn.L)
DNA replication proteins [BR:
xla03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
403373 (nbn.L)
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
403373 (nbn.L)
BRCA1-C complex
403373 (nbn.L)
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Gene cluster
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
BRCT
RTT107_BRCT_5
PTCB-BRCT
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
403373
NCBI-ProteinID:
NP_001084420
Xenbase:
XB-GENE-943040
UniProt:
Q6XV80
Structure
PDB
PDBj
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All DBs
Position
6L:complement(135896533..135935283)
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AA seq
763 aa
AA seq
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MWRLVAESAAGGTYHFLTGTDYVVGRKNCAILIPEDQSISRCHATLSVSHPSANLGQTNA
ASVLSIKDSSKYGTTVNGDKMNPAVPRNLKSGDKVTFGVFNSKYRVEYEPLVVCSSCLDN
SEKNSLNQNLIHLGGHVLNNWTEKSTHLVMTSIKVTIKTICALICCKPIIKPDYFCELLH
AIQEKRPLPDYRSFIPSVDEPSLTPESLDLSENVKRKSIFKDKVFLFLNAKQYKKLSPAV
LFGGGKTDLLMGELKDASVLDNPATCVIDVAMTESQLSESQSTQPWITSTLDLLQSKGLR
TIPEAEIGLAVINVSTEIYCNPRRRAASGTEAGTSKKMNVLSSTLCQGIAVDETILPAPT
LDITAYAANTEPQDQTGTSWMNISGVREVKETPGNSSSHSRSKGCLQKDPKSGSSSNDLR
QTLFREDETDTRKNTPSLLPTKSSARDVTKTSQKLQPTKKIDSYFQSLAKKRDRAEDEKE
ASSSKLPRVETLSSQTLEEKFPPVTQTLEEENFDSDLDMELAMSCDQILNDSMGSKAAMP
EDSTVKKRKVPDDHVVEESDVDSDEGIRANAEQNDTKSDINVTKRRKVDSEIEGTKEPTI
KPREIGTKAQVKTNSPEMAPAIRKEIEVKKELDIKKEPKSQWEESKFVPDLQGETDALPS
RLLLTEFKSLVVSRPVRNNNATSNSSNGKCHNFKKFKKVAYPGAGSFPNIIGGSDLIAHD
RKKNAELEQWLRQEVEEQTQQVREESLAEDLFRYNPKPSKRRR
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtggaggctggtggcagagagcgctgcaggaggcacgtatcattttctcactggcacc
gattatgttgtggggcgcaagaactgtgctattttaattccagaagatcagtccattagt
aggtgccatgctacgttgtctgttagccacccaagtgccaatctgggccaaacaaatgcc
gcttcagtcctatcgataaaagactcatcaaagtatggcacaaccgtcaatggagacaag
atgaatcctgcggttccaaggaatttgaaatccggagataaggtcacattcggtgttttt
aatagcaagtatagggtggaatacgagcccttagtggtctgttcttcctgtttagataac
tcggagaagaattctttaaaccagaacctcatacatttaggtggccatgtgttgaataac
tggacagagaagagcactcaccttgttatgacttctattaaagtaactatcaagactata
tgtgcactcatttgctgcaaaccaatcataaaaccagactacttctgtgagctgcttcat
gccattcaggagaaaagaccattgcctgattatagaagttttataccttctgtagatgag
ccatcacttacacccgaatcactagatctttccgaaaatgtgaaacgcaaatccatattc
aaggataaagtattcctgtttctcaatgcgaaacagtataagaagctgagcccagcagtt
ctgtttggtgggggaaagacagatctgctgatgggggaactgaaagacgcatcagtactg
gataatccggcaacatgtgttattgacgtggccatgactgaatctcagctctccgaatcc
cagtctacacagccctggatcacttctacactggatttactgcaaagtaaaggtctgaga
acaattccagaagcagaaattggtttggctgttatcaatgtgtcaacagaaatttattgc
aatcctcgaagacgtgcagcaagtggaactgaggcgggaacatcgaagaaaatgaatgtc
ctgagttctaccctttgtcaaggtattgctgttgatgagaccatattacctgctccaaca
cttgatataacggcttatgctgccaatacagaaccgcaagatcagacaggtacatcatgg
atgaacatcagcggtgttcgtgaagtgaaagaaaccccgggtaacagtagcagccacagt
agatccaaaggttgcctacagaaggatccaaaaagtggcagcagcagcaatgatctcaga
cagactttattccgagaggatgaaaccgacaccaggaagaatactccatcgctcttaccc
acaaaatcttctgctcgagatgtgacgaagacttcccaaaaactgcagccaactaaaaaa
attgacagttactttcaatcgttggccaagaaaagagaccgggctgaagatgaaaaggaa
gcatcttcatcaaagttgccacgggtggaaaccctttcatcccaaactttagaggagaaa
ttcccgccagttacacaaacacttgaggaagagaattttgactccgatctggatatggaa
ttggcaatgtcatgtgatcagatactaaatgattccatggggagcaaagcagcgatgcca
gaagattcaacggtgaaaaaaagaaaggtgcccgatgatcatgtagtggaagagtctgac
gtcgatagcgatgaaggaatccgtgcgaatgcagagcagaatgatactaaaagtgatata
aatgtgacaaaaagaagaaaagttgattctgaaatagaaggcaccaaagagcccactata
aagccacgtgagataggaacaaaggcacaagtgaagacgaattctccagagatggctccg
gcaataaggaaagagattgaggtcaagaaagagttggatatcaagaaagagcctaaatct
caatgggaagaatctaagtttgttcctgatctccaaggggaaactgatgcgctgcccagc
agactcttacttactgagtttaagtcattggtggtgagccggccagtcaggaacaataac
gccacaagcaatagtagcaacggaaagtgccataactttaagaaattcaaaaaggtagcg
tacccaggcgctggaagctttcccaatattattggagggtctgatttaattgcgcatgat
agaaagaaaaatgcagagctggaacagtggcttcgccaggaagtggaggaacaaacgcaa
caagtcagagaagagtcacttgctgaggatttgttcaggtacaatcccaaacctagcaaa
agaagacgctga
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