Xenopus laevis (African clawed frog): 414468
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Entry
414468 CDS
T01010
Symbol
rab5b.L, rab5b
Name
(RefSeq) RAB5B, member RAS oncogene family L homeolog
KO
K07888
Ras-related protein Rab-5B
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04137
Mitophagy - animal
xla04144
Endocytosis
xla04145
Phagosome
xla04148
Efferocytosis
xla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
414468 (rab5b.L)
04145 Phagosome
414468 (rab5b.L)
04137 Mitophagy - animal
414468 (rab5b.L)
04148 Efferocytosis
414468 (rab5b.L)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
414468 (rab5b.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
414468 (rab5b.L)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xla04147
]
414468 (rab5b.L)
04031 GTP-binding proteins [BR:
xla04031
]
414468 (rab5b.L)
Membrane trafficking [BR:
xla04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
414468 (rab5b.L)
Endosome - Lysosome transport
414468 (rab5b.L)
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
414468 (rab5b.L)
Exosomal proteins of other body fluids (saliva and urine)
414468 (rab5b.L)
Exosomal proteins of colorectal cancer cells
414468 (rab5b.L)
Exosomal proteins of melanoma cells
414468 (rab5b.L)
GTP-binding proteins [BR:
xla04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
414468 (rab5b.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
AAA_16
MCR_beta
Motif
Other DBs
NCBI-GeneID:
414468
NCBI-ProteinID:
NP_001084521
Xenbase:
XB-GENE-6252844
UniProt:
Q6NU64
LinkDB
All DBs
Position
2L:complement(144715724..144748603)
Genome browser
AA seq
185 aa
AA seq
DB search
MAGRGAARPNGQSQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
QASPNIVIALSGNKADLTSKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIGKT
VWAKN
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggccgggagaggagctgcaaggccaaatggtcagtcgcaagccagtaaaatatgccag
ttcaaattggtactgctgggcgaatccgcagtaggaaaatcaagcctggtattgcgtttc
gtgaaggggcagtttcatgagtttcaggaaagtaccattggtgcggcatttctcacacag
tctgtctgcctggatgacacaactgtaaaatttgaaatctgggatacagcaggacaagag
agataccacagcttggcacccatgtattacaggggagcacaggctgccattgtggtgtat
gatatcacaaaccaggaaacatttgccagagccaagacatgggtgaaagagttacagagg
caagccagtcctaacattgtgatagctttgtcagggaacaaggctgacctcactagtaaa
cggatggtggagtatgaagaagctcaagcatatgcagatgacaacagcctgctgtttatg
gaaacttctgccaagaccgcaatgaatgtcaatgacctgtttcttgcaataggtaaaact
gtgtgggccaaaaactga
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