Xenopus laevis (African clawed frog): 414472
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Entry
414472 CDS
T01010
Symbol
rpap3.L, rpap3
Name
(RefSeq) RNA polymerase II-associated protein 3
KO
K23002
RNA polymerase II-associated protein 3
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xla03021
]
414472 (rpap3.L)
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
414472 (rpap3.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
RPAP3_C
TPR_2
TPR_8
TPR_11
TPR_16
TPR_14
TPR_BSK1_C
TPR_19
TPR_12
TPR_9
TPR_7
ANAPC3
Motif
Other DBs
NCBI-GeneID:
414472
NCBI-ProteinID:
NP_001084525
Xenbase:
XB-GENE-5779079
UniProt:
Q6NU95
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All DBs
Position
3L:70038477..70071195
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AA seq
660 aa
AA seq
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MSSPSKAIELQLQMKQNAEDLQDFMREMESWEKDIKQKDAKLRNQTGVENQILPPIRNKD
FKKKKKNKPKPPLEKSQEDCLNPKKKLLDYEYWDKLDVDKALEDIDKDNSNETSSDSECG
DEDAITVDTEKALSEKEKGNNYFKSGKYDEAIECYTRGMDADPYNAILPTNRASAFFRLK
KFAVAESDCNLAIALNRDYAKAYARRGAARLALKNLQGAKEDYEKVLELDANNFEAKNEL
RKINQELYSSASDVQENMATEAKITVENEEEKKQIEIQQRKQQAIMQKDLGNAYFKEGKY
EIAIECYSQGMEADNTNALLPANRAMAYLKIQKYKEAEADCTLAISLDASYCKAFARRGT
ASIMLGKQKEAKEDFEMVLKLDPGNKQAVLELAKISQELRSIEKDRNGNKDSNQRKLINT
VEKLPHLRSTKPLRRMVIEEVGGPAEIFNTSLKETNHRKADSVDLTAETNTQDLNQEQNI
CNSPDVPSPKIPKIEEISDTPGSCEPTTGEDYLTSRPSPPKIEKVVSTFSESLNIGIPAV
PTNSFQLESDFRRLKGNPDLLYVYLKQIEPTLYGKLFKKALDPDLFSDILTILREQFINK
DSPDLIFEILQRLSELKRFDMAVMFLSESDKNNAHILFSHLEQSMNANVSFNALKKKYGL
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctccaagcaaagcaattgaactgcagctgcagatgaaacaaaatgctgaagat
ctgcaagattttatgagggagatggaaagctgggaaaaggatatcaagcaaaaagatgcc
aagctgagaaatcagacaggtgtggaaaaccagatattgcctcctatcagaaataaagat
ttcaagaaaaagaaaaagaacaagcctaaaccaccacttgaaaagagccaagaagattgt
cttaaccccaagaaaaagttacttgattatgagtattgggacaaacttgatgtggacaaa
gctctagaagatatagataaagacaacagcaatgaaacgtcctcagattcggaatgtgga
gatgaagatgcaataactgtagacacagaaaaagcactttcagagaaagaaaagggaaat
aattattttaaaagtggaaagtatgatgaagctatagaatgctatactagaggaatggat
gcagatccctataatgcaattttaccaacaaatcgtgcatctgctttctttcgactcaaa
aaatttgctgttgccgaatctgactgtaatcttgcgattgctctaaatagagattatgct
aaagcgtatgctcgccgaggagcagctcgtctcgctcttaaaaatctacagggagcaaag
gaagattatgaaaaagttttagaattggatgcaaacaattttgaagccaagaatgaacta
aggaaaattaaccaggagctgtattcatccgccagtgatgtccaagaaaatatggccaca
gaagccaaaattactgttgaaaatgaagaagaaaaaaaacaaatagagattcagcagcgg
aaacaacaagctattatgcaaaaagatctgggcaatgcatattttaaagaagggaagtat
gaaattgccattgagtgctatagtcagggaatggaagcagacaacacaaatgcattatta
cctgcaaatagagcaatggcatacctgaaaattcaaaagtataaggaagcagaggctgac
tgtacattagccatatcacttgatgcatcttattgcaaagcttttgctagaagaggaaca
gccagtataatgcttggaaagcaaaaagaagcaaaagaagattttgaaatggttttaaaa
ttggatcctggaaacaaacaagctgttctggaactagctaaaatatctcaggaattaagg
agcatcgaaaaagacagaaatggaaataaggatagtaaccagagaaagttaataaataca
gttgaaaagcttccacatctgagatccactaaacctttaagaaggatggtaattgaagaa
gttggaggcccagctgaaatttttaacacaagtcttaaagaaacaaaccacaggaaagcg
gattctgtggatttaacggctgagaccaatactcaagatttgaatcaagaacagaacatt
tgcaactcacctgatgttcccagtccaaagatcccaaaaatagaagaaatcagtgataca
cctggttcttgtgagcctactactggagaggattatctcacatctcggccatcacctcca
aaaatcgaaaaagttgtgtcaacattttctgagtctctgaatatagggattcctgcagtg
cctacaaactctttccagcttgagtcagacttcagaagattaaaagggaatcctgaccta
ttgtatgtgtacctaaaacaaattgaacccacgctttatggtaaattgttcaaaaaagct
ttggatccagacctgttcagtgatattctgacaattctgagagagcagtttattaacaaa
gacagccctgatctcatctttgaaatattgcaaaggctatctgaactgaagagatttgac
atggctgtaatgtttctttcagaatcagataaaaataatgcccacatcttattttcacac
ctagagcaatcgatgaatgccaatgtctcttttaatgctttgaagaaaaaatatggactt
taa
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