Xenopus laevis (African clawed frog): 414571
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Entry
414571 CDS
T01010
Symbol
dhx15.L
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
414571 (dhx15.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
414571 (dhx15.L)
03009 Ribosome biogenesis [BR:
xla03009
]
414571 (dhx15.L)
Enzymes [BR:
xla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
414571 (dhx15.L)
Spliceosome [BR:
xla03041
]
Complex A
U2 snRNP components
U2 related factors
414571 (dhx15.L)
Complex B
414571 (dhx15.L)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
414571 (dhx15.L)
Ribosome biogenesis [BR:
xla03009
]
Eukaryotic type
90S particles
Helicases
414571 (dhx15.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
ResIII
Flavi_DEAD
Atrophin-1
AAA_29
AAA_7
AAA_30
Motif
Other DBs
NCBI-GeneID:
414571
NCBI-ProteinID:
XP_041444235
Xenbase:
XB-GENE-1008948
UniProt:
Q6NU35
LinkDB
All DBs
Position
1L:complement(33367215..33407878)
Genome browser
AA seq
761 aa
AA seq
DB search
MSKRHRLDLGDDYVTSKKRSGDGKDRDRERDDRSKDRDRDRDRDRERDRDKDKDSRGSSN
SPFITAGAMPTLKPAAVAQGINPFTNLPHTPRYYDILKKRLLLPVWEYKERFTEILMKNQ
SFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRAVACTQPRRVAAMSVAQRVADEMDVMLG
QEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVVILDEAHERTLATDILMG
VLKEVVRQRNDLKVIVMSATLDAGKFQVYFDSCPLLTIPGRTHPVEIFYTPEPERDYLEA
SIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLPP
QQQQRIFEPPPPKKPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVE
SLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQL
KKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKM
VIASCDYNCSNEILSITAMLSVPQCFIRPTEVKKAADESKMRFAHIDGDHLTLLNVYHAF
KQNHESSQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALV
TGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIK
PEWLVKIAAQYYDMGNFPQCEAKRQLERIVAKFQTKEYSQY
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcggcaccggctggacctcggggacgactatgtcacgagcaagaaaagaagc
ggcgacggaaaagaccgagatcgagagagagatgaccgttctaaggatcgagaccgggat
cgtgacagagatagggaaagggacagagacaaggataaagactcgcgcggttcatcaaat
tctccttttataacggctggtgcaatgcctactctaaaaccagcagcagttgctcaaggc
attaatccatttaccaatttaccgcacactcctcgctactatgacatcttgaaaaagagg
ctactgttgccagtatgggaatacaaagaacgctttaccgaaattctaatgaagaatcag
agcttcgtactggttggcgaaactggatctgggaaaaccactcagattccacagtggtgt
gtagactacatgagatcattgcctggtcccaaaagagctgttgcctgtacccagccaaga
agagtggccgccatgagtgtggctcaaagagttgccgatgaaatggatgtcatgttgggt
caggaagttggttattccatcagatttgaagactgcagcagtgcaaaaacaatcttgaaa
tacatgacagatggtatgttactccgagaagccatgaacgatcctttgttggaacgctat
ggtgtggtgattcttgacgaagctcacgaaaggaccttagcaacagatatcctaatgggt
gttttaaaggaagttgtaagacaaagaaatgacttaaaggttatagttatgagtgccact
ttagatgctgggaaattccaggtatatttcgatagctgccctcttttaacaatccctggc
cgaacacaccctgtagaaatcttctacactccagagccggagcgggattacctagaggct
tccattcgaacagtgatacagattcacatgtgtgaggaggaggaaggagatcttctgttg
tttcttactggccaagaggaaattgatgaggcgtgcaagagaatcaaacgggaaatcgat
gacttgggccctgaagttggagacatcaaaatcattcctttatattcaaccctcccaccc
cagcaacagcaaagaatatttgagccaccaccacccaagaaacctagtggagcaatagga
agaaaagtcgtagtttccactaacatcgctgaaacatctttaactatagacggggttgtg
tttgtgatcgatcctggttttgccaagcaaaaggtatataatcctcgaattcgagtggaa
tctctcctggttactgccatcagcaaagcttcagcacaacaaagagccggtcgtgctggt
cgtacccgtcctggcaagtgcttccggctttatacagagaaggcttacaaaacggaaatg
caggacaatacttaccctgaaatattgaggtccaatttgggttccgtagtattgcagcta
aagaaacttggcattgatgatttggttcattttgatttcatggaccctccagctcctgaa
actttaatgcgtgccctggaacttttgaactacctagctgccttaaacgatgacggagac
ctgacagagttgggatctatgatggcggaattcccactggacccacagctggccaagatg
gttatcgccagttgcgactacaactgctctaatgagatcttatccataacagccatgttg
tcagtcccacagtgtttcattcgtcccacggaagtcaagaaagctgccgatgagtcgaag
atgaggtttgcccacatcgacggtgatcatttgacgctgctgaacgtataccacgctttc
aaacagaatcacgagtcatctcagtggtgttatgacaacttcattaactacagatccctg
atgtcggcagacaatgtacggcagcagctgtcacgaatcatggacagatttaacttgccg
cgaagaagcaccgattttacaagcagagattattacattaatatcaggaaagctttggtt
actggttattttatgcaggtggcacacttggagagaactggtcattacctaacggtgaaa
gacaaccaggtggtgcagctgcatccctcaacagttctcgaccacaaacccgagtgggtc
ctgtacaatgagtttgtactcacaacaaagaactacatccgcacgtgtactgatataaag
ccggaatggttggtgaaaatcgcagctcaatattacgacatgggcaacttccctcagtgt
gaagcaaagaggcaattagagcgcattgtggccaaatttcagacgaaggaatattcacag
tactga
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integrated database retrieval system
