Xenopus laevis (African clawed frog): 414692
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Entry
414692 CDS
T01010
Symbol
snx27.L, snx27
Name
(RefSeq) sorting nexin family member 27 L homeolog
KO
K17936
sorting nexin-27
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
414692 (snx27.L)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xla04990
]
414692 (snx27.L)
Membrane trafficking [BR:
xla04131
]
Protein recycling
Others
Others
414692 (snx27.L)
Domain-containing proteins not elsewhere classified [BR:
xla04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
414692 (snx27.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
RA_2
SNX17-27-31_F1_FERM
SNX17_FERM_C
PDZ_2
USP7_C2
RBD
SNX17-31_F2_FERM
RA_3
DarA_N
TetR_C_26
Motif
Other DBs
NCBI-GeneID:
414692
NCBI-ProteinID:
NP_001084727
Xenbase:
XB-GENE-959091
UniProt:
Q24JX4
A0A974CAL0
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All DBs
Position
8L:complement(133634581..133643883)
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AA seq
547 aa
AA seq
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MADEEGDGIHSGQRNGGGGPGSTGGPRVVRIVKSESGYGFNVRGQVSEGGQLRSINGELY
APLQHVSAVLPGGAADSAHIRKGDRILEVNGVNVEGATHKQVVDLIRAGEKELVLTVLSV
PPHEAENLDPSDDSSGQSFYDYTEKQAVPISIPTYKHVEQNGEKFVVYNVYMAGRQLCSK
RYREFAILNQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRGLEEYLEKVCSIRIIGES
DIMQEFLSESDENYNGVSDVELRIALPDKSTVTVRVKKNSTTDQVYQALGAKIGMDAITA
NYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTVRKWLFTTSEEALLKDNDL
AVSFFFHQAVDDVKRGYIKAEDKSYQLQKLCEQRKMLMYLNMLRGCDGYNEIIFPHCSCD
SRRKGHVVTSISIKHFKLLACTDEGQLENQVIAFEWDEMQRWDTDEEGMAFCFEYARGEK
KPRWVKIFTPYFNYMHECFERVFCELKWRKEVEEEATDKDNKNCSIDSTCSKNIFQIVRL
QQKDTST
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggagggggacgggatccattctgggcagcggaacgggggcggagggccg
ggcagtaccgggggcccgagggtggttcgtatcgtcaagtccgagtccggttacggcttc
aatgtccgcgggcaggtcagtgagggggggcaactgcgcagcatcaacggagaactctac
gcgcccctccagcacgtgagcgccgtgttacccgggggggccgccgactccgcccacatc
cgcaagggggaccggatcctcgaggtgaatggggtgaatgtggaaggtgccactcacaag
caagtagtggatctgatccgggccggagagaaggagctcgtcctcacggtcctgtctgtg
ccaccccacgaggcggagaacctggatccaagtgatgactcctcggggcagtcgttctat
gattacaccgagaagcaggcggtgcccatttccatccccacatacaaacacgtggagcag
aatggagagaagtttgtggtatacaacgtgtacatggccggcaggcagctctgctccaag
cgataccgggagtttgccatcctcaaccagaacctgaaacgagagtttgccaacttcacc
tttccccggctgccagggaagtggccgttctctttatcggagcagcaactggacgctcgc
aggaggggcctggaagagtatttggaaaaagtgtgctccatacgtatcataggggagagt
gacatcatgcaggagttcctgtccgagtctgatgagaattacaatggggtatctgacgtg
gagctgcgcattgccttaccggacaaatccactgtaaccgtgagagtgaagaagaacagt
accacggaccaggtgtaccaggccctcggtgccaagatcgggatggacgcaattacagcc
aattattttgcactctttgaggtcattaatcactcctttgtcaggaagctggcccccaat
gagttcccccacaagttatatgtacagaattacacctctgcggttcccgggacttgtctc
actgtccggaaatggctgttcacaacctcagaagaggctttgctgaaggacaatgacttg
gctgtctctttcttcttccaccaggcagtggatgatgtgaagcgaggctacatcaaggca
gaagacaaatcttaccagctgcagaagttgtgtgagcagcgcaagatgttgatgtatctg
aatatgttgaggggctgtgatggctataacgagattatcttcccgcactgctcctgtgac
tcccgcaggaagggacatgttgtcacctctatcagtatcaagcacttcaaactgctggct
tgcaccgatgagggacagctagagaaccaggtgattgcgtttgagtgggatgagatgcag
cggtgggacacagacgaggagggaatggcgttctgctttgagtacgcccgaggagagaag
aaaccacgatgggtgaagatcttcactccttacttcaactacatgcacgaatgcttcgag
agggttttctgtgagctgaagtggagaaaagaggttgaagaagaggcgaccgacaaggac
aataagaattgcagtattgacagtacatgcagcaagaacatctttcagattgtacggctg
cagcagaaggacaccagcacctaa
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