Xenopus laevis (African clawed frog): 431869
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Entry
431869 CDS
T01010
Symbol
syvn1.L, hrd1, syvn1, syvn1-a, syvn1-b
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin A
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04120
Ubiquitin mediated proteolysis
xla04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
431869 (syvn1.L)
04120 Ubiquitin mediated proteolysis
431869 (syvn1.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
431869 (syvn1.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
431869 (syvn1.L)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
431869 (syvn1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
zf-Nse
Endonuclease_7
zf-C3H2C3
Prok-RING_4
zf_RING_Vps8_fungal
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
431869
NCBI-ProteinID:
NP_001084825
Xenbase:
XB-GENE-1005365
UniProt:
Q6NRL6
LinkDB
All DBs
Position
4L:23244850..23269782
Genome browser
AA seq
605 aa
AA seq
DB search
MTGASLALTAAVVAHAYYLKNQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKFMGKVFF
GQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLAEDRVDF
MERSPNISWLFHFRILALMLLLGVLDAFFVSHAYHSLVIRGASVQLVFGFEYAILMTVIL
TVFIKYILHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYVAFMTIMVKVHTFPLFAIR
PMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATAEELQAMDNVCIICREEMVTGAKRLP
CNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTQPQTPTEQQNQHQNQAQQQPTPVIPP
QPNFPPGILPPFPPGMFPLWPPMGPFPPVPGAPGGNPPDEANPGSSSGSSPRPGETSNVG
SESQPGAALPGFPFPPPFLGMPILPPFGLPPMPMPPAGFTGLTDEELRAMEGHERQNLEA
RLQCLQNIHTLLDAAMLQINQYLTVLASIGPPQPPISSTSTSTSSAASASTAPTTSNISE
PVIPVDTTSTVTNTESSQQSAPPAPVSVETLSGAEGGETTTEEPDNVELRRRRLQKLETG
TTDSQ
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgaccggtgccagtctggccctcacggctgccgtggtggcccatgcttattacttgaaa
aatcagttctaccccaccgtggtgtacctgaccaaatcaagtcccagcatggcagtcctt
tatattcaagcatttgttttggtcttcctcctgggaaagtttatgggcaaagttttcttt
gggcaactacgagctgctgagatggagcatcttctggaacgttcctggtacgctgtgact
gaaacatgcctggcattcactgtgttccgtgatgatttcagcccacgctttgtggctctc
tttacccttttgctgttcctaaagtgttttcactggctggctgaggatcgtgttgatttc
atggaacgcagtccaaatatttcctggcttttccacttccgtatacttgctctaatgtta
ctcttgggtgtactggatgctttctttgtgtcacatgcctatcacagccttgttatcaga
ggggcatctgtgcagctagtctttgggtttgagtatgccatacttatgactgtgatcctc
actgtgtttataaaatacatccttcactcagtggatctccaaagtgaaaatccatgggat
aacaaagctgtctacatgttatacactgaacttttcacgggttttataaaggtcttgctc
tacgtggcttttatgacaatcatggttaaagttcacacattccctctctttgcaatccgg
cccatgtacctggcaatgaggcagtttaagaaagcagtgacagatgctataatgtcaaga
agagcaataagaaatatgaacactctttatcctgatgcaacagcagaggagcttcaagcg
atggacaatgtgtgtatcatctgcagagaagaaatggttacaggagcaaagcgactacca
tgcaatcacatttttcacaccagctgcttgcgctcttggttccagagacaacagacgtgt
cctacttgccgtatggatgtgctgagagcttctcttccaactcagcctcaaacccccaca
gagcagcagaatcaacatcagaatcaggctcaacaacaaccaactcctgttatccctcct
cagcctaactttcctcctggtatactaccccctttccctcctggtatgtttcctctgtgg
cctcctatgggtccattcccacctgttcctggtgcgcctggtggtaatcctcccgatgaa
gccaaccctggatcatcctctggttcttcaccaagacctggagaaacatctaatgttgga
tcagagtcacagcctggtgcagctctgccagggtttcctttcccacctccttttttagga
atgccaatactgcctccatttggtctaccgcctatgcctatgccccctgctggtttcact
ggtctgacagatgaggagctgagagcaatggaaggacatgagagacaaaacctggaagcc
cgattgcagtgtcttcagaatatccatactctgcttgatgcagcaatgctacaaattaac
cagtatctaacagtgctggccagcataggtccccctcaaccacctatttcctctacatct
acatctacatcttcagctgcatcagcttctacagcgcctactacctctaatatttcagag
ccagttatccccgtggacaccacctccactgtgaccaacacagaatcatcacaacagtca
gctcctccagctccagtaagtgtggagactctcagtggagcagagggaggggagaccaca
acagaagaaccagacaatgtagaactaagaaggcgcagacttcagaaactggaaactgga
acaacagattctcaatga
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