Xenopus laevis (African clawed frog): 431880
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Entry
431880 CDS
T01010
Symbol
snx1.L, snx1
Name
(RefSeq) sorting nexin 1 L homeolog
KO
K17917
sorting nexin-1/2
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
431880 (snx1.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
431880 (snx1.L)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xla04990
]
431880 (snx1.L)
Membrane trafficking [BR:
xla04131
]
Endocytosis
Macropinocytosis
Sorting nexins
431880 (snx1.L)
Domain-containing proteins not elsewhere classified [BR:
xla04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
431880 (snx1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
Sorting_nexin
BAR_3_WASP_bdg
HR1
Motif
Other DBs
NCBI-GeneID:
431880
NCBI-ProteinID:
NP_001084834
Xenbase:
XB-GENE-992262
UniProt:
Q6NRS4
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Position
3L:complement(100080079..100108242)
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AA seq
509 aa
AA seq
DB search
MADESSDSQRLPPELDEEAPGTDSDTEGEDIFTGAQSEVTAPKTNKEPVPDQTSRERENG
LFLDDDDQDLFAESTVKLSVDNSHNIQKEEPPKVSLTTPMLIDAASASTKPKPKQKSYEE
LEEEEQEDQFDVKISVTDPEKIGDGMNAYVVYQVTTQTNLLMFKSKHFTVKRRFSDFLGL
YEKLSEKHSQNGFIVAPPPEKSLIGMTKLKVGKEDSSSTEFLERRRASLERYLQRIVSHP
SLLQDPDVREFLEKDELPRAVSTQTLSGAGFLKMFNRATDPVNKMTIKMNESDVWFEDKF
QEVESEEQHLRKLHQVVETLVNHRKELALNTALFAKSLAMLGSSEDNTALSRALSQLAEV
EEKLEQLHQEQANSDFFLLAELLADYIRLLSAVRGVFDQRIKTWQRWQDAQATLQKKREN
EARLLWANKPDKLQQAKDEIAEWESRVTQYERDFERISVTVRKEVMRFEKEKSKDFKSHI
VKYLETLLNSQHKLVKYWEAFLPEAKVIS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgaaagcagtgatagtcagcggcttcccccggaattggatgaggaggccccg
ggaactgacagtgacacagaaggagaggatatctttaccggagctcagtcagaggtgact
gctccaaagacaaataaagagcctgtgccagaccagacttcaagagagagagagaatggc
ctctttctggatgacgatgaccaagatttgtttgcagagtccactgtcaagctgtcagtg
gataattctcataacatccaaaaagaggagcctccaaaagtgtcactaaccacccccatg
cttattgatgcagctagcgcctccaccaagcccaagcccaagcaaaagagctatgaagag
ctggaagaggaagagcaagaggaccagtttgacgtgaagatcagtgtcacagacccagag
aaaattggtgatggtatgaatgcatatgtagtctaccaagttacaactcagaccaattta
ttaatgtttaagagcaagcacttcactgtgaaaagacggttcagtgacttcctgggcctg
tatgagaaactctcggaaaagcactcacagaatggatttattgtagcaccacctccagag
aagagccttataggtatgaccaaattaaaagtgggcaaagaggactcgtcttcaacagag
tttctggagaggagaagagcatctttagaaaggtacctccaaagaatagtaagtcatcct
tcactccttcaggaccctgatgtgagggagtttttggagaaggatgagcttccacgtgca
gtcagcacccaaactctaagtggagcaggatttctcaagatgttcaacagagccactgat
ccagtcaataaaatgacaattaaaatgaatgaatcagatgtttggtttgaagacaaattc
caggaggtggaaagtgaggaacaacacctccgaaagctgcaccaagtggtggaaacttta
gtgaatcacaggaaagaactcgcactgaacactgctctatttgctaagagtctggccatg
ctggggagctcagaggataatacagccctttcccgggctttgtcccagctggctgaggtg
gaggagaagctagagcagctacatcaagagcaggccaacagtgattttttcctgcttgca
gagctgttggccgattacatccgtttactctctgcagtcaggggggtatttgatcagcga
ataaaaacctggcagcgatggcaggacgctcaggcaaccttacagaagaagagagaaaat
gaggctagattgctgtgggccaacaaaccagacaaactacaacaagcaaaggatgagatt
gcagagtgggaatcccgggtcacacaatatgagagggattttgagaggatttctgttaca
gtacgaaaggaggtcatgcggtttgagaaagagaagtctaaggattttaaaagtcacata
gttaaatatctggagacactcttgaattcacagcacaaactggttaaatactgggaggcg
tttttacctgaagcaaaagttatatcctaa
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