Xenopus laevis (African clawed frog): 431883
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Entry
431883 CDS
T01010
Symbol
rfc2.L, rfc2, rfc40
Name
(RefSeq) replication factor C subunit 2 L homeolog
KO
K10755
replication factor C subunit 2/4
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03030
DNA replication
xla03410
Base excision repair
xla03420
Nucleotide excision repair
xla03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
431883 (rfc2.L)
03410 Base excision repair
431883 (rfc2.L)
03420 Nucleotide excision repair
431883 (rfc2.L)
03430 Mismatch repair
431883 (rfc2.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xla03032
]
431883 (rfc2.L)
03036 Chromosome and associated proteins [BR:
xla03036
]
431883 (rfc2.L)
03400 DNA repair and recombination proteins [BR:
xla03400
]
431883 (rfc2.L)
DNA replication proteins [BR:
xla03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
431883 (rfc2.L)
DNA Replication Termination Factors
ELG1-RFC complex
431883 (rfc2.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
431883 (rfc2.L)
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
431883 (rfc2.L)
Check point factors
HRAD17(Rad24)-RFC complex
431883 (rfc2.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
RCF1-5-like_lid
AAA_14
AAA_16
Mg_chelatase
AAA_24
Viral_helicase1
AAA_11
Rad17
RuvB_N
AAA_assoc_2
AAA_19
MipZ
DNAX_ATPase_lid
nSTAND3
AAA_5
ABC_tran
AAA_28
AAA_18
AAA_25
AAA_30
AAA_23
MeaB
SLFN-g3_helicase
NTPase_1
RNA_helicase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
431883
NCBI-ProteinID:
NP_001084837
Xenbase:
XB-GENE-999117
UniProt:
Q6NRU3
LinkDB
All DBs
Position
2L:104590987..104599136
Genome browser
AA seq
348 aa
AA seq
DB search
MDVEMVESAAGESGTKQAAPATKSLAVTYELPWVEKYRPLKLNEIVGNEETVSRLEVFAR
EGNVPNIIIAGPPGTGKTTSILCLARALLGPTMKDAVLELNASNDRGIDVVRNKIKMFAQ
QKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRC
AVLRYTKLTDAQVLARLMDVVEKEKVQCTDDGLEAIVFTAQGDMRQALNNVQSTCAGFGF
VNSTNVFKVCDEPHPLLVKEMLQHCVNANIDEAYKIVAHLWKLGYSPEDIIGNIFRVCKT
FQMPEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTAVSTS
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggaaatggtagaaagtgctgccggggaatcaggcaccaaacaggccgccccg
gctaccaagagcctggccgtaacttatgaacttccttgggtagaaaaatacaggccattg
aagctaaacgagatagtcggaaatgaagaaaccgtcagccgcctggaagtatttgcaaga
gaaggaaatgttccaaatatcataatcgctgggcctcctggaacaggtaaaaccacaagt
attttgtgtttggcacgtgcgcttttgggacccaccatgaaagatgctgtcttagagctc
aacgcctcaaatgatcgaggcatcgatgtagtgagaaacaaaattaaaatgtttgctcaa
cagaaggtcactcttccaaaaggacgtcacaaaattattatcttggatgaagcggacagc
atgactgatggagcccagcaagctttgagaagaactatggaaatctattccaagacgaca
cgctttgctctagcgtgcaatgcttcagacaagattattgagcccatccagtcccgatgt
gcggtactccgttacacaaaactgacagatgctcaggtccttgcaaggctgatggatgtt
gttgaaaaggagaaagttcagtgtacagatgatgggcttgaggctatagtattcactgca
cagggggatatgagacaggcactgaataacgtgcagtccacttgcgctggatttggcttt
gtaaatagcacaaatgtatttaaggtgtgtgatgagccccatcctttattagtgaaagaa
atgttacagcactgtgtcaatgccaacattgatgaagcatacaagattgtggctcatctg
tggaaactcggttattctcctgaagatataataggcaacatatttagagtgtgtaaaact
ttccaaatgccagaatatcttaaactggaattcataaaggaaatcggatacacacatatg
aaaatagctgaaggagttaactctctattacagatggctggacttcttgctcggctgtgt
cagaagactgcagtttctacaagctga
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