Xenopus laevis (African clawed frog): 432022
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Entry
432022 CDS
T01010
Symbol
sptlc1.L, sptlc1
Name
(RefSeq) serine palmitoyltransferase, long chain base subunit 1 L homeolog
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla00600
Sphingolipid metabolism
xla01100
Metabolic pathways
Module
xla_M00094
Ceramide biosynthesis
xla_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
432022 (sptlc1.L)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xla01007
]
432022 (sptlc1.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
432022 (sptlc1.L)
Amino acid related enzymes [BR:
xla01007
]
Aminotransferase (transaminase)
Class II
432022 (sptlc1.L)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
PAD
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
432022
NCBI-ProteinID:
NP_001084963
Xenbase:
XB-GENE-1004886
UniProt:
Q6IRQ6
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Position
1L:complement(150166138..150202966)
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AA seq
472 aa
AA seq
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MATSQQWVLVEMVQAFYEAPAYHLILEGILILWIIRLIFFKTYKLQERSDLTEKEKEELI
DEWRPEPLVPPVSKDHPALNYNIVSGPPSHKIVVNGKECINFASFNFLGLLDNARVKSAA
LASLRKYGVGTCGPRGFYGTFDVHLELEERLAKFMKTEEAIIYSYGFATVASAIPAYSKR
GDIVFADEAACFAIQKGLQASRSSIKYFKHNDMDDLERLLKEQELEDQKNPRKACVTRRF
IVAEGLYMNTGDICPLPKLVELKYKYKVRIFLEESLSFGVLGEHGRGVTEHFGINIDDID
LISANMENALASIGGFCCGRSFVIDHQRLSGQGYCFSASLPPLLASAAIEGLNIMEENSE
VFHDLRVKCKRIHKALQGISGLKVVGESFSPAFHLQLEKSTGCREKDMKLLQNIIDHCMT
REIALTQARYLEKEEKFLPPPSIRVVVTVEQTEEELDTAASIIKQAASLFLD
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgagtcagcaatgggttttggtggagatggtgcaggcgttttacgaggcacct
gcataccatttgattctggaagggattctgattttgtggattatcagactaatatttttc
aagacatacaaattgcaggagcgttcagacctcacagagaaggagaaggaagaattgatt
gatgaatggcgcccagagcctcttgttcctccagtctctaaagatcatccagctctcaac
tataatattgtttctggacccccaagtcacaagattgttgtaaatggaaaagaatgcatt
aattttgcatcgtttaatttccttggtcttctagataatgcgagagttaagagtgcagct
cttgcttctcttagaaagtatggtgttggaacctgcggaccaaggggattttatggtact
tttgatgtgcatttagaactggaagaaagattggcaaaatttatgaagaccgaagaagct
ataatttattcctatgggtttgcaactgttgctagtgcaatcccagcatattccaaaaga
ggagacattgtgtttgcggatgaggctgcatgttttgctattcaaaaagggttgcaagca
tcacgaagcagtatcaagtactttaaacacaatgatatggatgacttagagagattacta
aaggagcaggagctggaagatcaaaagaatccccgaaaagcttgtgtgacaaggagattt
attgttgcagaaggattgtatatgaatactggtgatatttgtcctcttcctaaactggtt
gaattgaagtataagtacaaagtgaggatatttctagaagagagcctctcttttggcgtt
ttgggggaacatggccgaggagttacagaacattttggaataaatattgatgacatagac
ctcattagtgccaatatggagaatgcattggcatcaattggaggattttgctgtgggcga
tcatttgtcatcgatcaccagcgactgtctggtcaaggttactgcttctctgcatccttg
cctcctctcttggcttcagcagctattgaaggtcttaacatcatggaggaaaactcagag
gtatttcatgacctaagggttaaatgcaagcgaattcataaagctttgcagggaatttct
ggtttaaaagtggtaggtgagagcttctctcctgcatttcacctgcaactagaaaagagc
actggatgtcgtgaaaaagatatgaaattgctccaaaatataatagatcattgtatgacc
agggaaattgcattgactcaggcacgttatttggaaaaagaagagaaatttcttccccct
ccaagcataagagtggtagtgacggtggagcagacagaggaagagctggatacagctgca
tcaattattaaacaagctgcatcattgttcctggattaa
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