Xenopus laevis (African clawed frog): 432044
Help
Entry
432044 CDS
T01010
Symbol
pcdh20.S
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
432044 (pcdh20.S)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xla01009
]
432044 (pcdh20.S)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xla04515
]
432044 (pcdh20.S)
Protein phosphatases and associated proteins [BR:
xla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
432044 (pcdh20.S)
Cell adhesion molecules [BR:
xla04515
]
Cadherins
Protocadherins
432044 (pcdh20.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
432044
NCBI-ProteinID:
XP_018105405
Xenbase:
XB-GENE-865054
UniProt:
A0A8J0ULE3
LinkDB
All DBs
Position
2S:120888643..120894172
Genome browser
AA seq
930 aa
AA seq
DB search
MTAVSSGLNYQGNERIIHARGKLLSHRDSLSLDMGQPTSSSSPLRIILQTAQHLLFLWLL
AHVRGSLFSSASNSRATELLYTLQEGLPKGVHIGSIGDDLQLDFFSDPPLSFSLASKGPS
EKYVNLNNSTGELSTSSEELDREALCQHSLVAQECVLLLDVIILPQEYFRLIKVKIAIID
INDNAPRFPVPQIYISVPENAPVNTRIVIEHPAYDPDGGTNGVQTYRLVDYHGVFTLDVE
ENESGERTPYLIIMGPLDREMKAEYETTIIAEDGGNPPLVGSATLSILISDVNDNCPQFN
TSQINSTLYGNSTIGTQVATVHAVDKDLGPNSVITYAFSERVQQATKEYFHLDEIKGIIK
LSKRIDGSTAQQHKLTILANGPGCIPTVITVFISINKVIFRPPELVPRYIANEENGVIYL
KELEPVHSPIAFFTIKDPDEKYQVNCYLEGQGPFRLSAYKPYNNEYLLETTDVLDYELKQ
SYNIAVVALSYDGYQVKKLLKVQILDENDNSPVFTESTVEITIEENNEPNAFLVKLYATD
ADSGERGLVSYFLGLDAPSYFSIDNMTGILSVSSILDREEKEKYRFTVRARDAGFPSRES
VATVHITVLDKNDNNPRFISRDFSFFVPENFPGFGEIGVISVTDADSGKNGWIALSIVNG
SDIFVIDNGKGLLRAKVSLDREQQSSYTLWVEAVDGGDPTLSSTAKITILLLDVNDNPPV
VLFPQSNMSYLLVLPSTLPGSPVTEVYAVDKDTGMNAVIAYSIIGRRGPKPESFRIDPIT
GNITLEEALMRNDCGLYRLLVKVSDHGYPEPLFSTVMVNLFVNDTVTNESYIETLLRKEP
DINIEEKEPQIAMEPSQKEMESDSCTPTLVTLSITCLGSVILVTLMGMYICLRKGKNDHG
INENAEVQIPLNGKLDFHMLEKRPMEICNI
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgactgcagtttcctcgggattaaactaccaggggaatgagaggatcatacacgccagg
ggaaagctgctctcacacagagactctctgagcctggatatggggcagcccaccagcagc
agcagcccgctcaggatcattctccaaactgctcagcacttgttgtttctgtggctgctc
gctcacgtcaggggatctctcttcagctcagcgagtaacagcagggccacggaattgctt
tacacactgcaagaaggcttgcccaagggagttcacataggaagcattggggacgatctg
cagctggatttcttctctgatcctccactgtcattcagcctggcatcaaaggggccgagt
gagaagtatgtgaatctcaataacagcacaggcgagctgagtacatcatctgaggagctt
gacagggaagctctctgccaacattcgctggttgctcaggagtgtgtgctgcttcttgat
gtcatcattttgcctcaggaatatttcagacttatcaaagttaaaattgccatcattgac
atcaacgacaatgctccacgtttccctgtgccacagatttatatttcagtcccagaaaat
gctcctgttaacacgaggatagttatagagcaccctgcctatgatcctgatggtgggacc
aacggggtccagacctacaggttggtggattaccatggtgtctttacacttgatgttgag
gagaacgagagtggggagaggactccctaccttataattatgggccctctggacagagaa
atgaaagccgagtatgaaaccactattattgcagaagatggcggaaatcctccactcgtg
gggtctgccacactgtcaatactgattagcgatgtaaatgataactgcccgcaattcaat
acatctcagattaattcaactttgtatggaaattctaccatagggacacaagttgctacg
gtgcatgcagtggataaagacttgggtcccaattccgtgattacatatgccttcagtgaa
agggtgcaacaggcaacaaaggaatactttcacctggatgagataaaagggattataaaa
ctctcaaaaagaatagacggaagcaccgcccagcagcataaattaacaatacttgccaat
ggtccgggctgcattccaactgtgattactgtattcatttccataaataaagtcattttc
aggcccccagagctcgtgcctcgatatattgctaatgaggaaaatggtgttatttaccta
aaggaactggagcctgtccattctccaattgcattttttaccataaaagacccagatgaa
aaatatcaagtgaattgctacctagaagggcaagggccatttagactttctgcatacaag
ccatataataatgaatatttgctagaaactacagatgtactagactatgagttgaaacag
tcttataacatagcagtggttgcacttagttatgatgggtatcaggttaagaagctttta
aaagtccaaattctggatgaaaatgacaattcccctgttttcacagaatctactgtagag
ataactattgaagaaaacaacgagcccaatgcatttctggtgaaactttatgccacagat
gctgacagcggtgagcgtggtctagtatcttattttctagggctagatgcaccttcctat
ttttctatagataacatgacaggcattctttcagtttctagcatattggacagagaggaa
aaagaaaaatacagatttacagttagagcaagagatgccggctttccttcaagggaatct
gttgctacggttcatatcacggtgctggataaaaatgataataatcctcgatttatcagc
agggatttcagtttttttgtgcctgaaaattttccaggattcggtgaaattggagtgatt
agtgtcacagatgctgactctgggaagaatggatggatagctctatctatagtgaatgga
agtgatatttttgtcattgacaatggcaaaggactcttgagggcaaaggtttctctggac
agggagcaacagagctcctatactctttgggttgaagcagtcgatggtggtgacccaaca
ttgtcttctacagctaaaataacaattttgctgttggatgttaatgataacccaccagtg
gtcctcttccctcagtccaatatgtcatatcttcttgttcttccttccaccctcccaggt
tcaccagtcacagaagtttatgctgttgataaagacacaggtatgaatgctgttattgcc
tacagcatcataggtcgaaggggacccaaaccagaatcatttaggatagaccccataaca
ggcaacatcactttggaggaggcacttatgaggaatgactgtggattatacaggttgtta
gtaaaagttagtgaccatggctacccagaaccactcttttccacagtgatggtaaatctc
tttgttaatgacactgtaacgaatgaaagttatattgaaaccttgttgagaaaggagcct
gatatcaatatagaagaaaaggagccgcagatagcaatggagccctcccagaaagagatg
gaaagtgattcatgcacccctacattggtaaccctgtcaattacatgcctggggtctgtc
attttggtcactctaatggggatgtacatctgcttaagaaaaggtaaaaatgaccatggg
ataaatgagaatgcagaagttcaaattccattaaacgggaaactagacttccatatgctg
gaaaaaagaccaatggagatttgtaacatttaa
DBGET
integrated database retrieval system
