Xenopus laevis (African clawed frog): 432060
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Entry
432060 CDS
T01010
Symbol
polr2c.S, polr2c
Name
(RefSeq) polymerase (RNA) II (DNA directed) polypeptide C, 33kDa S homeolog
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03020
RNA polymerase
xla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
432060 (polr2c.S)
09124 Replication and repair
03420 Nucleotide excision repair
432060 (polr2c.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xla03021
]
432060 (polr2c.S)
03400 DNA repair and recombination proteins [BR:
xla03400
]
432060 (polr2c.S)
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
432060 (polr2c.S)
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
432060 (polr2c.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
432060
NCBI-ProteinID:
NP_001084998
Xenbase:
XB-GENE-998265
UniProt:
Q6IRR3
A0A974CYP2
LinkDB
All DBs
Position
4S:55007409..55018104
Genome browser
AA seq
275 aa
AA seq
DB search
MPYANQPTVRLTELTDENVKFIVENTDLAIANSIRRVFIAEVPTIAIDWVQIDANSSVLH
DEFIAHRVGLIPLTSDDIVDKLQYSRDCTCDEFCPECSVEFTLDVRCTEDQTRHVTSRDL
VSNNLRVIPVTSRSRDNDPNDYVEQDDILIVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVAFEYDPDNALRHTVYPKPEEWPKSEYSEIDEEEAQAPYDPTGKPERFYYNVESCGSLK
PETIVLSALSGLKKKLSDLQTQLSHEIQSDVLTIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacgcaaaccagcctactgtgcgtctcacagaactcacggacgagaatgtcaaa
tttatcgtggaaaacacggatttggcaatcgccaattcaattcgtagagtgttcatagca
gaagttcctactatagctatagactgggtgcagatcgatgcaaattcatctgtccttcat
gacgaattcatagctcacagagtcggactgatccctctgaccagtgatgatatagttgat
aagctgcagtactctagagattgtacatgtgatgagttttgtccagagtgctctgtggaa
tttactttagatgtcagatgcactgaagaccagacgcgccatgtgacgtctcgtgatctt
gtctccaacaacctccgtgttataccggtgacctcacgcagcagagacaatgaccccaac
gactatgtggagcaagatgatattctgattgtgaagcttaggaaaggtcaggagctgcgt
ctcagagcatatgcgaagaagggctttgggaaagaacatgccaagtggaatccaacagca
ggagtggcatttgaatatgacccagataatgcactgcgacacactgtataccctaagcct
gaggaatggccaaagagtgaatactctgaaattgatgaagaagaggctcaggctccatat
gatccaactggaaaaccagaaaggttttattataacgtggagtcttgcggatcccttaag
ccggagactattgttctttctgctctctcgggcctcaaaaagaaactcagtgatctccaa
acccagctcagtcatgaaatccagagtgatgtcctcaccattaactga
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