Xenopus laevis (African clawed frog): 432181
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Entry
432181 CDS
T01010
Symbol
gtf2h4.S, gtf2h4, gtf2h4.1, tfb2, tfiih
Name
(RefSeq) general transcription factor IIH subunit 4 S homeolog
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03022
Basal transcription factors
xla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
432181 (gtf2h4.S)
09124 Replication and repair
03420 Nucleotide excision repair
432181 (gtf2h4.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xla03021
]
432181 (gtf2h4.S)
03400 DNA repair and recombination proteins [BR:
xla03400
]
432181 (gtf2h4.S)
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
432181 (gtf2h4.S)
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
432181 (gtf2h4.S)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
432181
NCBI-ProteinID:
NP_001085110
Xenbase:
XB-GENE-5995107
UniProt:
Q6INF9
A0A974DLJ4
LinkDB
All DBs
Position
2S:complement(135137866..135159909)
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AA seq
455 aa
AA seq
DB search
MKLQRVHLKCKNLHEFLQELSPGVLDRLYNHPATCLAVFRELPGLAKNYVMRMLFLEQPL
PQAAVALWVKKENFNEHEENTQVLTGLRLWHTQQLPGGLQGLILNPIFRENLKIALLGGG
KAWADDGCLLGPDKHGKDVVSLDKYAEERWEVILHFMVGSPSAAVSQDLAQLLIQAGLMK
NESGEAPCISSAGFQFLLLDTPSQLWYFMLQYLKSAESRGMNLVEILSFMFQLSFSTLGK
DYSVEGMSDSLLTFLQHLREFGLVFQRKRKSRRYYPTRLAINLASGISGSVVDSHKQGFI
VVETNYRIYAYTDSELQIALIALFSEMLYRFPNLVVAQVTRENVQQAIGNGITAEQIIHF
LRTRAHPVMLQQNPALPPTITDQIRLWELERDRLRFSEGVLYNQFLSQVDFELLRNYARD
LGVLVFENPAKRVMVVTPGGHSDVKRFWKRQKQSS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaagctccagcgagtacatctgaagtgtaagaatttgcacgagtttcttcaggaactc
agcccaggggtgctcgatcgattgtacaaccatccagcaacttgtttggctgtgttcagg
gaactcccaggattggccaaaaattatgtgatgcgtatgctatttctggaacaacccttg
cctcaagctgctgttgcattatgggtcaagaaggaaaatttcaatgaacatgaggagaat
acacaggtcctgactgggttacgactttggcacacacaacaactccctggtgggttacag
ggcctgattctcaatccaatctttagagaaaatcttaaaatagcactgctaggcggggga
aaagcttgggcagatgatggctgcctactaggccctgataaacatggaaaagatgtggtc
tcgttggataagtatgcagaagagagatgggaggtcatattacattttatggttgggtct
ccaagtgctgctgttagccaggacttggcacaactgcttatacaggctggccttatgaaa
aatgagtctggggaagctccttgtatttcatcagctggcttccagtttttgcttttggac
acaccttctcagctctggtattttatgcttcagtatctcaaatctgcagagtctcgtgga
atgaatcttgtggaaatactctccttcatgttccagttaagcttctctactttgggaaag
gattactctgtggaagggatgagtgattccttactgacatttctacaacacctacgtgaa
tttggccttgtgtttcaaagaaagagaaagtcacgtcgatactatccaacacgtctggct
ataaaccttgcatctggtatatctggctcggttgttgacagccataagcaagggtttatt
gttgtggaaacaaactacagaatatatgcatacacagattcagagctgcaaattgccctt
attgccctgttctctgagatgttgtatcgcttcccaaatctggttgtggcacaagtcact
cgagagaatgtccagcaagcgatagggaatggcatcactgctgagcagataatccacttt
ctgaggacaagagcacatccagtgatgttgcagcagaatccagcgcttccaccaacaatt
actgaccaaataagactttgggaactcgagagagaccgcctacgtttttctgaaggtgtc
ctgtacaaccagtttctatcccaagtggactttgaacttttgagaaactatgcacgtgat
cttggagtgctcgtgtttgagaatccagccaagcgtgtgatggtagtgacccccggagga
cactctgatgttaagcgtttctggaaacgccaaaagcaaagctcctga
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integrated database retrieval system
