Xenopus laevis (African clawed frog): 432222
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Entry
432222 CDS
T01010
Symbol
samhd1.L
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03250
Viral life cycle - HIV-1
xla04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
432222 (samhd1.L)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
432222 (samhd1.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xla03400
]
432222 (samhd1.L)
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
432222 (samhd1.L)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
HD
SAM_Ste50p
HD_assoc_2
PDEase_I
Motif
Other DBs
NCBI-GeneID:
432222
NCBI-ProteinID:
XP_018090732
Xenbase:
XB-GENE-976506
UniProt:
A0A974BXY7
A0A1L8EU62
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Position
9_10L:complement(44398565..44433502)
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AA seq
632 aa
AA seq
DB search
MKGINGAKRVRHDASPTAQDGYVTPEKRVKRWSGGQTAANYREWDVEEVCLFLASHGLGE
LEVIFRENKIKGRILEYLTDSHLKDLQISSVALRLDLLSCLRMLCQNSPSIMKVFNDPIH
GHIELHPLLVRIIDTPEFQRLRYIKQLGGSYYVFPGASHNRFEHSIGVGYLAGCLVQALH
ERQPDLQIDMRDMLCVQIAGLCHDLGHGPFSHMFDGRFMPLACPQKKFKHESASVAMFDH
LIQSNGLEEAMKENGLCLPDDLTFIKEQIAGPLSSEAEQQFNSSPNSSSWPYRGRTEEKS
FLYEIVANKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFLKFARVCEVGSKKHICTRDKE
VGNLYDMFHTRNCLHRRAYQHKVGNIIETMITDAFVKADPHIKIEGANGKYYSISGSVDD
MVAYTKLTDNIYHQILYSNDPNLKEAREILQKVERRHLYKYIGQTHPHSNSRIEPDKYDK
LPADLASSVPQTSAKDVELHAEDFIVDVIHMDYGMKEQNPINNVRFYCKADPRKAIKIRR
DQVSQLLPEKFAEQIIRVYCKKTDEKSLETAKRYFIQWCMNKDFSKPQDGDVVAPDMTPL
KASWVDDDDDEDNEGPQQTELLHKSRVKLFTN
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcatcaacggggccaaacgagtccgccacgacgcctcccccactgcccaggat
ggttacgtgaccccggagaagcgagtgaaacgttggagcggcggccagaccgctgccaat
taccgggaatgggacgtggaggaggtgtgcttgtttctggctagccatgggctcggagag
ctggaggtgatcttcagagaaaacaagataaaggggcgaatactggaatatcttacagac
tcgcatttaaaagatctccagataagttctgttgctttaaggttggatcttctgtcctgt
ttgcgaatgctgtgccagaactcacccagtatcatgaaggtgttcaatgacccaatacat
ggtcacattgagttgcaccctctgctagtccgtatcattgacacccctgagtttcagcgc
ctgagatacatcaaacagctcggaggatcctattatgtctttcctggggcttctcacaac
agatttgagcactccattggagtgggatacctggccggatgtctagttcaggcattgcac
gagagacagccagaccttcagattgacatgagagacatgctctgtgttcagatagctgga
ctttgtcatgaccttggacatggacccttttcccatatgtttgatgggagatttatgccc
cttgcctgcccccaaaaaaagtttaagcatgagtctgcatcagtagcaatgtttgaccac
cttatacaatccaatggtttagaggaagcgatgaaagagaacggactttgcttacccgac
gacttaacctttatcaaagagcaaatagcagggcctctgtcatcagaagctgagcagcag
tttaactccagcccaaatagctcttcgtggccgtatcgaggtcggacagaagagaaaagc
ttcctctatgaaattgtggctaacaaaagaaatggcattgatgtggataagtgggactat
tttgccagggattgtcaccatctgggcattcaaaacaactttgactacaagcgattttta
aaatttgcccgagtttgtgaagtcggcagcaagaagcacatctgcacccgagacaaggaa
gttggaaatctgtatgacatgttccatacccgcaattgtctccaccgacgggcgtaccag
cacaaagtgggcaacatcattgagacaatgatcacagatgcttttgtaaaggcagaccct
cacatcaaaatagaaggggccaatggaaagtattattcaatctctggttcagtggatgat
atggtggcttataccaaactcacagataacatataccatcagatcctgtattctaatgat
cccaatctgaaggaagccagagaaatcttgcaaaaagtagaacggcgacacctgtacaaa
tacataggacaaacgcacccgcacagcaactccagaattgaaccggataagtatgataaa
ttaccagctgatctggcaagttcagttccacaaacatcagcaaaagatgtagaacttcac
gcagaggatttcatagtagatgtaatccatatggactatggaatgaaagagcagaatccg
ataaacaacgtgcgcttctactgcaaggctgatccacgcaaagcaattaagatcagaaga
gatcaggtttcccagctcctgccagagaaatttgctgagcagattatccgtgtttattgc
aagaaaactgacgaaaagagcttggagactgcaaaaagatactttattcagtggtgcatg
aacaaggatttctctaaaccacaggatggggatgttgtagctccagatatgactcccctg
aaagccagttgggttgatgacgatgatgatgaagataatgaaggcccacaacagacagag
cttctgcacaaatccagagtgaagctgtttactaactaa
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