Xenopus laevis (African clawed frog): 432335
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Entry
432335 CDS
T01010
Symbol
stau1.L, stau1, Staufen1, XStau, XStau1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xla01009
]
432335 (stau1.L)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
432335 (stau1.L)
Protein phosphatases and associated proteins [BR:
xla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
432335 (stau1.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
432335 (stau1.L)
mRNA cycle factors
Stress granule specific factors
432335 (stau1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Staufen_C
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
432335
NCBI-ProteinID:
NP_001085239
Xenbase:
XB-GENE-920445
UniProt:
Q5MNU4
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All DBs
Position
9_10L:complement(8489921..8514665)
Genome browser
AA seq
718 aa
AA seq
DB search
MDVTMSQAPKSPAAPLPKIQILNKNQHSPLPQPLSIPSTASPLPSENAGRPLQNSALPSP
SVTSSGPTAVSSNMANPKEKTPMCLVNELARFNKIQPVYKLLSEQGPAHSKVIPLGRWQD
YSLLERVGEERPRQMFTVQLTLGDQYWEAEGTSIKKAQHAAAAKALEGTKYPKPTVRPVR
GERKYPDSITPTVELNALCMKLGRKPIYKPLDPYTGIRSAYNYNMRGGGYPPRYFYPFPV
APILYQVELSVGGQQFHGKGRTRQAAKHDAAARALKSLHHEPLPDKPALNGKAADEENLN
KSEISQVFEIALKRNMSVNFEVTKETGPPHMKSFLTKVIVGEFLGEGEGKSKKISKKNAA
IAVLEELRKLPPLPTVEKMRPKIKKKTKSIVKLPTSPEYGQGMNPISRLAQIQQAKKGKE
PEYILITERGLPRRREFVMQVKVGNHAAEGSGTNKKVAKRNAAENMLEILGFKVPPPPPK
PALKTEEKLPVKKPGDGRKVTFYEPGSGEDGANHNKDDEFRMPYHSHQQLPAGILPMVPE
VAQAVGVNQGLHTKEFNRVAPNPAKATVTAMIARELLYAGISPTADTILKNNNAAGHVLR
GPFTRPSEQLNYLSRVQGLEVEYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHD
MAALNILKLLSELDQQNPEMPRTGNGPMSVCVKPEMESDPLLKPANSNTLGQTLDSTA
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcaccatgtctcaagctcccaaatcacctgccgcccccctcccgaagatccaa
atcctgaacaagaaccagcattctcctctcccccagcctctgagtatcccttctactgcc
agtccactgccctctgaaaatgcaggtagacctctccagaactctgctttaccctctcca
tctgtcacatccagcggtccaactgcagtttcttctaacatggcaaaccccaaagagaaa
acccccatgtgtcttgtgaatgagttagcccgtttcaacaaaattcagcccgtgtacaaa
ctgctgagtgaacaaggtccggctcattcaaaggtcattccgctaggacggtggcaggat
tacagccttcttgagagagtgggagaagaacgcccaagacaaatgttcacagtgcaactc
actctaggggaccagtactgggaggctgaagggacgagtattaaaaaagctcaacacgca
gctgccgccaaagccctggaagggacaaagtacccgaagcctacagtccgccctgtacgc
ggtgagagaaaatacccagacagcatcacgccaacggttgaactaaacgctctgtgcatg
aaactcggaaggaaacccatatataaacctttagatccctacactgggatccgctcggcg
tataactacaatatgcgaggaggcggttaccccccacggtacttctacccatttcctgtg
gcccccatcctctatcaagtggaactgtccgtcggagggcaacaattccacgggaaagga
aggacaagacaggcggccaagcacgatgctgcagccagagcactgaagagcctccaccac
gagcctctccctgacaaaccagcgctaaatgggaaggcggcagatgaagaaaatctaaat
aagtcggaaataagccaagtgtttgaaattgcacttaaacggaacatgtctgtgaatttt
gaggtaaccaaggaaactggccctccccacatgaagagttttctaactaaagtaatagtc
ggtgaattcctgggcgaaggcgaaggaaagagcaaaaagatatcgaagaagaacgctgcc
atagccgtgctagaggagctccggaaactgccccctcttccaacggttgagaaaatgagg
ccaaaaatcaaaaagaaaacaaagtccatcgtaaagcttcctactagtcctgaatatggt
caagggatgaacccaatcagcaggctggcacagattcagcaggccaagaaaggtaaagaa
cccgaatatattctgatcacagagaggggtctcccgaggcgccgagagtttgtcatgcag
gtcaaagtaggaaatcatgccgctgaaggctcgggcactaacaagaaagtcgccaaaagg
aacgctgctgaaaatatgttggaaatcctaggttttaaagtccctccgcctccccccaaa
cctgcactcaagacggaagaaaagctccctgtgaagaaaccgggagatggaaggaaagtg
accttttatgagccggggtcgggagaagatggcgctaaccataacaaagatgacgagttc
cggatgccttatcacagccatcagcagcttcccgcgggaattctccccatggtgcccgag
gttgctcaagcggtgggggttaatcaaggacttcacaccaaagaatttaacagggtggcc
cccaacccagccaaggcgactgtgaccgccatgattgcgagagagctgctgtatgcgggc
atctcccccacggccgacaccattctgaagaataacaacgcggcaggccacgtgctgcgc
ggtccatttacccggccctctgagcaattaaattacctgtctagagtccaaggattagag
gttgaatataaagactttcccaagaacaataagaatgagtttgtgtctctcataaactgt
tcctctcaaccgccattaatcagccacggcatcggcaaggatgtggagtcctgccatgat
atggctgcgttgaacatcttgaaattgctgtctgagctggaccaacaaaacccagagatg
cccagaacaggaaatggaccaatgtctgtatgtgtaaaacccgaaatggaaagtgatcct
ctcctcaaaccggctaactcaaacaccttggggcaaacactggacagcacagcctaa
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