Xenopus laevis (African clawed frog): 432348
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Entry
432348 CDS
T01010
Symbol
sec31b.S, sec31b
Name
(RefSeq) SEC31 homolog B, COPII coat complex component S homeolog
KO
K14005
protein transport protein SEC31
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
432348 (sec31b.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
432348 (sec31b.S)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
xla02044
]
432348 (sec31b.S)
Membrane trafficking [BR:
xla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
432348 (sec31b.S)
Secretion system [BR:
xla02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
432348 (sec31b.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
Beta-prop_EIPR1
EIF3I
TPR_Sec16
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_WDR19_1st
TPR_GEMI5
Beta-prop_DCAF4
Beta-prop_HPS5
Prp18
Beta-prop_DCAF12
MerB
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
432348
NCBI-ProteinID:
NP_001085250
Xenbase:
XB-GENE-5956604
UniProt:
Q6IR57
LinkDB
All DBs
Position
7S:complement(31548856..31607158)
Genome browser
AA seq
1212 aa
AA seq
DB search
MKLKEIERSAVQVWSPANQHPVFLATGTSAKQLDASFNTSAALEIFEVDLGDPHPAMKRR
GVYPVSNRFHKILWGSFGSDLLGSSGVIITGGDNGVITLYSASQILASGEEPVIAKNDKH
SSPVRALDLNPFQSNLLASGASDSEVFIWDLNNFTVPMTPGAKAQPIEDISAVSWNQQVQ
HILSSAHPSGKAVVWDLRKNEPVIKVSDHSNRMHCSGMMWHPEIATQLVLSSEDDRLPVI
QVWDLRFASSPLKMLENHTRGILSMSWSKDDPELLLSSAKDSRILCWNPNTSEVVYELPT
ENQWCFDVQWCPRNPSIFSAASFDGWISVYSVMGGSIEAMQRSQADKISLSFNSLDPFGT
GQPLPPLQVPQQVAQTTVIPPLKKPPRWIRRPVGVSFAFGGKLVSFDCPKASVQPNQESL
PRQVYISQVSIEKEFLARSSELQAALLSGNLVNYCQNKVQSSQDVYDKSIWNFLKVNFEQ
DAREKYLKLLGYNKEELDKKISNALGENFQNKSSPSEPEDIIQSIQSVSSQDSSSFTGQT
ASNSSSVEFFNLPPQDSAKFEIPVNSDTDGLISQALLMGNFEAAVDVCLKHGRFADAIIL
ANAGGEDLLRETQQWYFAQQKNKITTLLSSVVQHKWRDIVIKCDPQSWKETLALLLTYSK
PEEYAELCDILGNRLEIEGEGKLYSEACLCYISSGNVERLVECWVKSHDITNPLALQDLM
EKAMVLRKSIELLRGAELPPQGPVMAEKVAEYANLLASQGKLAAAMSILPVDSQETAVQR
LRDRLLNAQGEGVRSQRNTSYEPSIQPPFGLKGSKAPEGVHYSNRQNFSQSQPGTGVPPI
TAVPSVFTPQPLPTAPMGPPPGVPFQTVPGLPSNTYPRPPGAWQTYPAPQPPVPAFAHSP
SFKPTGHPVPNTAALPPSPVTGHLPPISTLNLTGFPTASGPMFCPPASIPSSVPAATQPV
SRTFTAMGQPSTPLSMASSQPPFNYPMGASFHHGGPGAPTSLPPPPTGYFPWLQNQPNPA
ASEQEAWSDPHAFKAGIQRKTSNPVVPLAPITSPVMNLPNESENLQPQLSSSYDFNQAPP
GAPKETSMQRMHRLPVEKIEKKEVPSEHQPLQKSFDGLVQRCSAVASDPKTKRKLEDALQ
RLECLYDKLRENNLSPHILAGLHEIARCVEARNYPQGLVVHTQVVSSSNFSEVSGFMPIL
KVLMTIASKLCV
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaaagaaatcgaacgatctgctgttcaagtctggagcccagccaaccaacac
ccagttttcttagcaacaggaacatcagcaaaacagcttgatgcctccttcaacaccagt
gctgccctggaaatttttgaggtggaccttggagacccccaccctgctatgaaaagaaga
ggcgtctatccagtctctaacaggttccataagatactttggggcagctttggaagtgac
ctgttgggttcgtctggagtgattattacgggaggagataatggagtgataactttatat
agcgcttctcagatcctcgcatcaggagaggaaccagttattgcaaaaaatgacaaacat
tctagccctgttagggctcttgatttaaacccatttcagagcaacctacttgcatcaggt
gccagtgattctgaggttttcatctgggacttaaacaacttcactgtgccaatgacccca
ggagctaaagctcagcccatagaagacatcagtgcagtttcttggaatcaacaggtacaa
cacatcttatcatctgcccatcccagtggcaaagctgtggtatgggatctccgcaagaat
gaacctgtcattaaagtcagtgaccacagcaacagaatgcattgctcgggaatgatgtgg
cacccagaaattgctacccagcttgtcctgtcctctgaagatgatcgcttacctgtaatt
caagtctgggacctgcgttttgccagctccccactgaaaatgctggagaaccacacaagg
ggcattctctctatgtcctggagcaaagatgacccagaactactgctgagcagtgcaaaa
gacagccgaatattatgctggaacccaaacacaagtgaagttgtttacgagctgcccaca
gaaaaccagtggtgttttgatgttcaatggtgtccacgtaatccatccatattttctgct
gcctcatttgatggatggataagcgtatattctgttatgggtggaagcatagaagcaatg
caaaggagtcaagcagacaagatttcattgtcctttaatagcctggatccttttgggaca
gggcaaccgctacctccactacaagtgccgcaacaagttgcacagaccactgtaatccct
cctttaaaaaagcctccaagatggattcgcaggccggtgggagtctcttttgcttttggt
ggaaaacttgtttcttttgactgtccaaaagcttctgtgcagccaaaccaggagtccctt
ccacggcaggtttacatcagccaagtcagcattgagaaggagttcttggcccgatccagt
gagctgcaagcagcattgctctctgggaaccttgtaaactactgccaaaataaagtgcaa
agttcccaagatgtctacgacaagagtatctggaacttccttaaggtgaattttgaacaa
gatgccagagagaaataccttaagctgcttggctacaacaaagaagaactggataagaag
atctcaaatgcactgggggagaactttcagaacaagagcagcccttcagagccagaggat
ataattcaaagcatccagtctgtctccagccaggattccagtagctttacaggacaaaca
gcatcaaattcttcttccgtggagttttttaatctacctcctcaagattctgccaagttt
gaaatcccagtaaattcagatactgatgggttgatcagccaggcacttctcatgggaaat
tttgaggctgctgtagatgtgtgtttaaaacatggacggtttgccgatgccattatatta
gccaatgctggtggagaagacctactaagagaaactcaacagtggtactttgctcagcag
aaaaataagataactacacttctgtcttcagtggttcagcacaagtggagggacatagtg
attaaatgtgatccgcagagctggaaggaaaccctggcactcctgctgacatactccaaa
cctgaggaatacgctgaactttgtgatattcttggaaaccgcttggagattgaaggagag
ggaaagttgtactcagaggcctgcctttgttatatatcctcaggaaatgtggagaggctg
gtagaatgctgggttaaaagccatgatataactaacccacttgcactgcaggatcttatg
gagaaagctatggttttgcgaaaatctattgaactacttcgaggagcagagttgccgccc
caaggaccagtgatggcagagaaagtggcagagtatgccaatctgttggcctcgcaagga
aaactggcagctgccatgagcattctgccagttgattctcaagagacggcagtacagcgg
ctgcgagatcgtctccttaatgctcagggagagggtgtgagaagtcagagaaatacatcc
tatgaacccagcatccagccacctttcggtttaaaaggaagcaaagcaccagaaggagtc
cactatagcaacagacagaatttctcacaatctcagcctggcactggagttccacctata
acagcagtgccttcagtattcacgcctcagccattgcccacagcaccaatgggcccccct
ccaggtgtgccatttcagacagtccctgggctaccttctaatacctaccctagaccaccc
ggtgcttggcagacatacccagcaccacagccacctgtaccagcatttgcacactctcca
tccttcaaaccaacaggccacccagtcccaaacactgctgctttgcccccatcacctgtg
acaggacatctgcctcccatcagcacactgaatttaactggttttcccacagcatcagga
cccatgttttgccctccagcctctattccttcttcagtgcctgctgctacacagcctgtt
tcaagaacatttacagctatgggccagccttccactcctctttccatggcctcctctcag
cccccatttaactaccccatgggtgcaagttttcaccatgggggacctggtgctcccaca
agtctaccaccaccccctacaggttatttcccctggcttcagaaccagccaaatccagca
gcaagtgaacaagaagcctggagtgatcctcatgctttcaaagctggtatacaacggaaa
acgtctaatccagttgttcctcttgcaccaatcacatctcctgttatgaaccttcccaat
gaatccgagaatttgcaacctcagctgagcagcagctatgacttcaatcaggctccccct
ggggcacctaaagaaacaagtatgcagaggatgcaccggctgccagtggaaaagatagag
aaaaaagaagtgccttcagaacatcagcccctgcaaaagtcatttgatggtctagtgcag
aggtgttcagctgtggcatcagacccgaaaactaagaggaaattagaagatgctcttcag
aggttggagtgtttatatgacaagcttagagaaaacaatctatcccctcacattctggct
gggcttcatgaaattgctcgttgtgtcgaggcccgcaattaccctcaaggtttggttgta
catacacaggtagtcagtagcagcaacttcagtgaggtctctggcttcatgcccatcctg
aaggtcctcatgactattgccagcaagctgtgcgtttag
DBGET
integrated database retrieval system
